Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0461 |
Symbol | |
ID | 5370845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 523425 |
End bp | 524198 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640828666 |
Product | hypothetical protein |
Protein accession | YP_001364692 |
Protein GI | 152999011 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCTGA TACTGATAAT CGTCATTTCA TGCTTATTTC TGCCCCAAGC GAGAGCAGAA ACCTCTGCTG TTGTCTGGCA AGCACACTGC CGCGATAGGC ATCCTGTTAT TTATTTCGAA AATGGTGAGT GCAAAGGCCC AGGTGCTGCG GTGATCAATC AAGTTATCAC CCGTCTAGGT CACACGGTAA ATTGGAGTAA TGTGCCTTGG GCACGCACGA TAAAAGTCGC CGAAACGGGA CAAGTCGACC TCATTCCCGT CCATTCGATG ACACCCGAGC GCAACAATTT TCTGGACCCT ATGCTACTGG GCTACGACAA GCGCTACGTC TATTACTTTG CCCTTGCGAA TCGACAGCTT GAGGTCAAAA ATTTCGATGA ATTAAAGCCT TACATCATTG GCGCACTTAG AGGCGCTTTT TACTGTCCGC AGTTCAATGA CAATCAAAAT CAACTAAAAG TGTCTTTTGT TAATGATAAC GGCCAGTTAA TCAATATGTT GAAGGCAGAA CGTATCGATT TAGCCATCAC CTCCGAACAA CATGAGATGC AATTCTTTGC TAAAGATCCC CAGCTTAAGC AGATGGAATA CGTCGACATC AGCAAGAACG GCCGCTACTT CAGCATTCCG CTCATGTCGC CGCTGCATCG ACATGCCAAG CAAGTTCACC AGATAGTCGA CGACATGCGC ACCTCAGGCG AAATCACTCG GCTATTTGAA TCCTATGGTG TCGAGCCTCC GCTAAATCTC ACCGAATCGC CCACCACTCA CTAA
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Protein sequence | MRLILIIVIS CLFLPQARAE TSAVVWQAHC RDRHPVIYFE NGECKGPGAA VINQVITRLG HTVNWSNVPW ARTIKVAETG QVDLIPVHSM TPERNNFLDP MLLGYDKRYV YYFALANRQL EVKNFDELKP YIIGALRGAF YCPQFNDNQN QLKVSFVNDN GQLINMLKAE RIDLAITSEQ HEMQFFAKDP QLKQMEYVDI SKNGRYFSIP LMSPLHRHAK QVHQIVDDMR TSGEITRLFE SYGVEPPLNL TESPTTH
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