| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0448 |
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| Symbol | |
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| ID | 5370248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 509283 |
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| End bp | 509858 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640828653 |
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| Product | hypothetical protein |
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| Protein accession | YP_001364679 |
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| Protein GI | 152998998 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGTT TGCAGTCATC GAAGGGCTTT ACATTAATTG AGCTGGTTGT GGTCATTATC
ATCCTTGGGA TCTTGGCCGT CGTCGCAGCA CCACGGTTTT TAAACCTAGG CCAAGATGCC
CACGATGCCA GAGCCAAAAC CGCATTTGCG GCCTTTGCCT CTGGTGTTAA GCTTTATCAC
AGTTGCTGGC TTGCGGGCGG TCACTCTGGT TATACCCAAG ATCTCGCCTG TTATGGTGAC
GGAAAACTCG ACTCGACCAC CACAGGATTT CCACTGGGAA TAGAGACTGC AACCGCTGAT
GCCGGTGCTA AATTGCAGGG CGATTATTGT GGTCAGTTAT GGCAAGGTCT TTTGGCTAAT
AATGAATTTG TCATTGCCGA TCAATACTCT TGGCGCACAG TTCCCAATGT CGACATTGTT
TACTGGTATG GTGCCGTCGA CATAAAAGAT CCCAATGCTT ACTGCATTTT CAACTATGTC
TCGGACGATC GCAGCTTCGG CAGTGAAAAC TGGGATTTAA AATACTATCC CTTCGATGGC
CGCACTATTG TAGGTCGATC CACACTTTCC CAATAA
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| Protein sequence | MSRLQSSKGF TLIELVVVII ILGILAVVAA PRFLNLGQDA HDARAKTAFA AFASGVKLYH
SCWLAGGHSG YTQDLACYGD GKLDSTTTGF PLGIETATAD AGAKLQGDYC GQLWQGLLAN
NEFVIADQYS WRTVPNVDIV YWYGAVDIKD PNAYCIFNYV SDDRSFGSEN WDLKYYPFDG
RTIVGRSTLS Q
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