Gene Shew185_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0430 
Symbol 
ID5372892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp485574 
End bp487967 
Gene Length2394 bp 
Protein Length797 aa 
Translation table11 
GC content50% 
IMG OID640828635 
ProductTonB-dependent receptor 
Protein accessionYP_001364661 
Protein GI152998980 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.61093e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTAG GGATTATCGC ATTGGCAGTG TCATCCACAC TGGCCATTCC AGCTGTTCAA 
GCCGAAGAAC AACAGCCTGG CTTCGAGAAA ATCGAGATCA TAGGTTCACG CATAGCCCTG
CGCACGGCAA CTGACAGTGT TGCCCCTGTA GACATTATCA CCGCCGAGCA GCTCGAATCG
ACCGGCATGA CTGAAACCGC TAAAGCACTG CAATTTGCCG CTCCAAGCTA CAGCTTCCCA
TTCTCCTCAG TTACTGACGG TTCAGATGCG GTGCGCCCCG CGAGTTTGCG CGGCCTGTCG
CCCGACCACA CCTTAGTACT AGTGAACGGC AAACGTCGTC ACGGCTCAGC GCTCGTGCAT
TTAAGTGGTA CTGTGGGTAA AGGTTCATCT AACGTCGACT TAAACGCTAT CCCTATGACG
GCGATTAAGC GCATCGAAAT TTTGCGTGAT GGTGCCTCGG CACAATACGG CTCGGATGCG
ATTGCCGGCG TCATTAACGT GGTGCTTAAG GACAGCGACC AAGGCGGTAG CATCTCGGCT
CAAGCAGGAC AAACCTACAT AGGTGATGGC GAGCAATGGC GTGTGGGTGT AAACCACGGC
ATCAGTTTAA GTGACGATGG CTTTGTGAAT GTCTCCCTAG AGGCCCATCA TAAAGACAGC
ACTAACCGCG CCGGATTGGA CCCTCGTCAA CAGTATGAAA AATTACCCGA TGGCTCAGCC
GATCCCCGCG AAGCCACATT CAACCGTAAG AGTCACCAGG TCGGCGATGC CGAATATGAC
AACTTAGGTC TATTCATCAA CGCTGCCCAG CCCATCACAA AAGATGGCAA GCTCTATGCG
TTTGGTGGCA TCAGCCAACG TGAAACTAAG TCAGGCGCCT TTTACCGCCG TGCACTCGAC
GCCCGTAACT TAACCGAAAT CTATCCAGAC GGTTTCTTGC CGCAAATCAA TCCTAAAATT
ATCGATGCGT CCTTAGTGCT GGGGTATGAA TTAAGCCTGG GCGAGTGGAA TATCGATACT
TCGGCTGGCC ATGGCGAAAA CTCATTTAAC TACAATATTG TTAATACCTT AAACGCCTCT
TTAGGCCCAG ATAGCCCAAC CGAGTTTGAC GCGGGCACAC TCACAACTCG TGAAACCAAT
CTTAATCTCG ATGCCTCGCG CTATTTTGCC TTTGCCAATG ACTCTGAAAT CCTGTTTGCG
ACGGGTGTGT CGTGGCGCCA AAACGGCTAT CAAATTGAAG CCGGCGAAAC GGGTTCATAC
ATCAATGGGG GTTACGACAA CCGCGCTGCA GGCAGCCAAG GTTTCACTGG TTTTACCCCT
GAGTCGCAAG TAGATGAAAC CCGTGATAAC ACCGGCGTTT ATATGGAACT CGAAAACCAG
TTAACCAATG AGTTCTACTG GGCGGCGGCG CTGCGTTACG AAAACTATTC TGACTTTGGT
GGCAACACCA GTTGGAAATT AGCGGGCCGT TACGATTTCA CCGATAACTT GGCCCTGCGC
GGTACCATCA ACACTGGCTT TAGAGCGCCG AGCGTACAAC AACTGTACTT CAGCAATATC
TCGACGCTGT TTAATCCCGA TCCTGTGACT GGTCAGCTGG TGCCTATTGA GTCAGGCACT
TTTAACACCC TATCGCCAGT GACCAAAGCA CTAGGTATTA ATGAGTTAGA TCCCGAACTA
TCCCAGTCAT TCAGTTTAGG CTTGGTGTAC ACCAATGACA CAGGCTTAGC ACTGACATTA
GATGCATATC AAATCTCCAT CGATGATCGC ATTATTCTGT CGAGCTCAGT GACGCCTAAT
GATTCGCCCG CCGTAGCGGC AGCGCTGGCG GGCACCAATG CAGAATCGGC GCGCTTCTTT
ATCAACGCCG TCGATACCCG TACCCGTGGC GTTGACCTTG TAGTGAGCCA AGATTTTGAT
ATCGGCTCTT GGGGTGATTT ACGGGCGAAC TTAGCCTATG CCTACAATAA GACTGAAATC
CAAGATATTC ATTTCCCACA AATTTTAGAT GGGTTAGGCA AAAAGCTATT CGATAGCATA
GAACAAACTC GCATGACCTC GGCGACGCCG CATAACACAG GTAACTTGGG CTTGACCCAT
GAGCTAGGCG ACTTTAAGAC CAATATTCAC CTCAGCTACT TTGGTGATTA CACTGTTGGC
TATGCCACGG GTGATGTGAA TTACAGCGAT CAATGGGTGA TGGATCTGTC GGTGAGATAC
GCAGCAACCG ATGCGCTAAG TTTCACCGCT GGAGTACAAA ACCTGTTTGA TGTGTATCCC
GAAAAAACAC CAGCGATTAA CAGCAACAAC GGCATTTTCG TCTATCCATT AACCAACACT
CCGTTTGGTT TTAATGGTGG CTACTACTTC TTAGAAGCTA AATACACTTA CTAA
 
Protein sequence
MRLGIIALAV SSTLAIPAVQ AEEQQPGFEK IEIIGSRIAL RTATDSVAPV DIITAEQLES 
TGMTETAKAL QFAAPSYSFP FSSVTDGSDA VRPASLRGLS PDHTLVLVNG KRRHGSALVH
LSGTVGKGSS NVDLNAIPMT AIKRIEILRD GASAQYGSDA IAGVINVVLK DSDQGGSISA
QAGQTYIGDG EQWRVGVNHG ISLSDDGFVN VSLEAHHKDS TNRAGLDPRQ QYEKLPDGSA
DPREATFNRK SHQVGDAEYD NLGLFINAAQ PITKDGKLYA FGGISQRETK SGAFYRRALD
ARNLTEIYPD GFLPQINPKI IDASLVLGYE LSLGEWNIDT SAGHGENSFN YNIVNTLNAS
LGPDSPTEFD AGTLTTRETN LNLDASRYFA FANDSEILFA TGVSWRQNGY QIEAGETGSY
INGGYDNRAA GSQGFTGFTP ESQVDETRDN TGVYMELENQ LTNEFYWAAA LRYENYSDFG
GNTSWKLAGR YDFTDNLALR GTINTGFRAP SVQQLYFSNI STLFNPDPVT GQLVPIESGT
FNTLSPVTKA LGINELDPEL SQSFSLGLVY TNDTGLALTL DAYQISIDDR IILSSSVTPN
DSPAVAAALA GTNAESARFF INAVDTRTRG VDLVVSQDFD IGSWGDLRAN LAYAYNKTEI
QDIHFPQILD GLGKKLFDSI EQTRMTSATP HNTGNLGLTH ELGDFKTNIH LSYFGDYTVG
YATGDVNYSD QWVMDLSVRY AATDALSFTA GVQNLFDVYP EKTPAINSNN GIFVYPLTNT
PFGFNGGYYF LEAKYTY