Gene Shew185_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0427 
Symbol 
ID5370315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp483055 
End bp483669 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content47% 
IMG OID640828632 
ProductSNARE associated Golgi protein 
Protein accessionYP_001364658 
Protein GI152998977 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.160448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGAAG CGCTACAACA TATCATCACC GAACTCACCC CTTGGCTACA GCAATATGGC 
TATGTGCTGC TATTTGTCGC GATTGCCGTC GAGGGTTTTG GCATTCCAGC GCCGGGGCAA 
TCCTTATTGA TTGTCGCAAG TTTATTAGCT GCTACAGGGC AAATGTCACT GCCATTGGTG 
TTGATCGTCG CAGCTTGCGC TGCACTCTGC GGTAACAGCT TGGGATATTT TATCGGTTGG 
CGTTTTGGTG ATGTATTGCT TAAGAAGGGC TGGATAAAAC CGCAATTGGA AGACAAAATC 
CATGGCGTTA TTGGCCAATA TGGCATTGCC GCTTTAGTGC TTAGTCGTTT TGTTGAGGGA 
TTAAAACAAT TTATGTTTAT CGGCTGCGGC TTGGCTAAAA TGCCACTTAA GCAATTTGTA 
ATAGGTAATG CCCTAGCCAC CAGCATTTGG GTGGCACTTT TTGGGTTAGG CCCAGTGTTA 
ATCCGCGATG AAATTGCTCC TATGCTGGCA TTTTACCACC AGCACAAATA CCCCACATGG 
GCCATTGTCA GCCTAATACT CGCCGCGCTA ATCACTTTTA CTTGGCGCAG GTGGCAAACC 
AAAAATCCGC AGTAA
 
Protein sequence
MPEALQHIIT ELTPWLQQYG YVLLFVAIAV EGFGIPAPGQ SLLIVASLLA ATGQMSLPLV 
LIVAACAALC GNSLGYFIGW RFGDVLLKKG WIKPQLEDKI HGVIGQYGIA ALVLSRFVEG 
LKQFMFIGCG LAKMPLKQFV IGNALATSIW VALFGLGPVL IRDEIAPMLA FYHQHKYPTW 
AIVSLILAAL ITFTWRRWQT KNPQ