Gene Shew185_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0409 
Symbol 
ID5373403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp458209 
End bp460935 
Gene Length2727 bp 
Protein Length908 aa 
Translation table11 
GC content48% 
IMG OID640828608 
Productpreprotein translocase subunit SecA 
Protein accessionYP_001364641 
Protein GI152998960 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.66764e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGGTA AATTACTGAC AAAAGTATTT GGTAGTCGCA ACGACCGCAC CCTTAAAGGG 
CTTCAAAAGA TCGTTATTAG CATTAACGCA CTAGAAGCTG ATTATGAAAA ATTAACCGAT
GAAGCTTTAA AAGCGAAAAC CGCTGAGTTC CGTGAGCGTT TAGCTGCCGG CGCTTCATTA
GATAGCATCA TGGCTGAAGC GTTTGCTACA GTACGTGAAG CGTCTAAGCG CGTATTTGAC
ATGCGCCACT TCGACGTACA GTTACTCGGT GGTATGGTAC TCGACAGTAA CCGTATTGCT
GAGATGCGTA CGGGTGAAGG TAAAACCTTA ACGGCAACCT TGCCCGCTTA CTTAAACGCA
TTGACGGGCA AAGGCGTTCA CGTGATTACA GTGAACGATT ACTTAGCACG TCGTGATGCC
GAGAATAACC GCCCACTGTT TGAGTTCCTC GGTTTAACCG TCGGCATCAA CGTGGCAGGT
CTCGGTCAGC ATGAAAAGAA AGCTGCTTAC AACGCCGATA TCACTTACGG TACCAACAAC
GAGTTTGGTT TCGATTATCT GCGCGATAAC ATGGCGTTTT CACCGCAAGA ACGAGTACAA
CGCCCGTTGC ACTACGCCCT AATCGATGAA GTGGATTCAA TCTTAATCGA CGAAGCGCGT
ACGCCGCTGA TCATCTCTGG CGCCGCTGAA GATAGCTCTG AGCTATACAT CAAGATCAAC
ACCTTGATCC CAAATCTTAT CCGTCAAGAT AAAGAAGATA CGGAAGAGTA TGTGGGTGAG
GGTGACTACA GCATCGATGA AAAAGCCAAA CAAGTGCATT TCACCGAGCG TGGTCAAGAA
AAAGTAGAAA ACCTGTTGAT CGAGCGCGGC ATGTTAGCCG AAGGCGACTC ACTCTATTCT
GCTGCAAATA TTTCCCTATT ACACCACGTC AACGCGGCGC TCCGTGCGCA CACGCTGTTT
GAGCGTGATG TGGATTACAT AGTACAAGAC AACGAAGTCA TCATAGTCGA TGAACACACA
GGTCGTACTA TGCCGGGTCG TCGTTGGTCA GAAGGCTTAC ATCAAGCTGT CGAAGCCAAA
GAAGGCGTGC ATATTCAAAA CGAAAACCAA ACATTGGCTT CAATTACCTT CCAGAACTAC
TTCCGTCAAT ATGAGAAGCT GGCAGGTATG ACAGGTACAG CCGACACTGA AGCGTTCGAA
TTCCAACACA TCTATGGATT AGACACAGTC GTTGTGCCGA CTAACCGTCC AATGGTGCGT
AAGGATATGG CGGATTTGGT TTACCTTACC GCCGATGAAA AATATCAAGC TATCATCAAA
GACATTAAAG ATTGCCGCGA ACGTGGTCAG CCAGTATTGG TGGGTACAGT CTCAATCGAA
CAGTCTGAAC TGTTAGCGCG CTTAATGGTG CAGGAAAAGA TCCCGCACGA AGTCTTAAAT
GCTAAATTCC ACGAACGAGA AGCTGAAATC GTCGCGCAAG CTGGCCGTAC TGGTTCAGTG
ACCATTGCCA CTAACATGGC AGGTCGTGGT ACCGATATAG TGCTTGGCGG CAACTGGAAC
ATGGAAATCG ATGAACTCGA TAATCCAACA GCTGAGCAAA AAGCTAAGAT CAAAGCCGAT
TGGCAAATTC GTCATGATGA AGTCGTCGCC GCGGGTGGTT TGCACATCCT AGGTACCGAA
CGTCACGAAT CACGCCGTAT CGATAACCAG TTACGTGGTC GTGCGGGTCG TCAAGGTGAC
GCGGGTTCAT CACGCTTCTA CCTGTCGATG GAAGATAGCT TAATGCGTAT CTTCGCCTCA
GATCGTGTCT CTGGCATGAT GAAAAAGCTG GGTATGGAAG AAGGCGAAGC TATCGAGCAT
CCATGGGTGT CTCGTGCAAT CGAAAACGCT CAACGTAAAG TTGAAGCACG TAACTTCGAT
ATCCGTAAGC AATTACTCGA ATTTGATGAC GTAGCTAACG ATCAACGCCA AGTGGTTTAC
GCTCAGCGCA ACGAGTTGAT GGATGCGGAA AGTATTGAAG ATACTATCCA AAACATTCAA
GACGATGTGA TTGGCGCGGT CATCGATCAG TATATTCCAC CACAATCAGT AGAAGAGCTG
TGGGATATCC CAGGTTTAGA GCAACGTCTA CACCAAGAGT TTATGCTCAA ACTACCTATC
CAGGAATGGT TAGATAAAGA AGACGATCTG CATGAAGAGA GTCTGCGTGA GCGTATTATC
ACTGCTTGGG GCGATGCGTA TAAGGCAAAA GAAGAAATGG TTGGCGCGCA AGTGCTACGC
CAGTTCGAGA AAGCCGTTAT GCTACAAACG CTCGATGGTC TGTGGAAAGA ACACTTAGCG
GCGATGGACC ATCTGCGTCA AGGTATCCAC TTACGTGGTT ACGCACAGAA AAATCCAAAG
CAAGAATATA AGCGTGAGTC GTTTGAGTTA TTCCAACAAC TATTGAATAC CTTGAAACAC
GACGTCATCA GTGTGCTGTC GAAAGTACAA GTTCAAGCTC AGTCAGATGT GGAAGAAATG
GAAGCGCGTC GTCGTGAAGA AGATGCCAAG ATCCAGCGCG ACTATCAACA CGCAGCGGCA
GAGTCGCTTG TTGGCGGTGG TGATGAGCAT GAAGCTGTCA CTGCGCAAGC ACCGATGATC
CGTGATGGTG AGAAAGTGGG TCGTAACGAT CCTTGTCCTT GTGGCTCAGG TCGCAAGTAC
AAACAATGTC ACGGCAAGTT AAGTTAA
 
Protein sequence
MFGKLLTKVF GSRNDRTLKG LQKIVISINA LEADYEKLTD EALKAKTAEF RERLAAGASL 
DSIMAEAFAT VREASKRVFD MRHFDVQLLG GMVLDSNRIA EMRTGEGKTL TATLPAYLNA
LTGKGVHVIT VNDYLARRDA ENNRPLFEFL GLTVGINVAG LGQHEKKAAY NADITYGTNN
EFGFDYLRDN MAFSPQERVQ RPLHYALIDE VDSILIDEAR TPLIISGAAE DSSELYIKIN
TLIPNLIRQD KEDTEEYVGE GDYSIDEKAK QVHFTERGQE KVENLLIERG MLAEGDSLYS
AANISLLHHV NAALRAHTLF ERDVDYIVQD NEVIIVDEHT GRTMPGRRWS EGLHQAVEAK
EGVHIQNENQ TLASITFQNY FRQYEKLAGM TGTADTEAFE FQHIYGLDTV VVPTNRPMVR
KDMADLVYLT ADEKYQAIIK DIKDCRERGQ PVLVGTVSIE QSELLARLMV QEKIPHEVLN
AKFHEREAEI VAQAGRTGSV TIATNMAGRG TDIVLGGNWN MEIDELDNPT AEQKAKIKAD
WQIRHDEVVA AGGLHILGTE RHESRRIDNQ LRGRAGRQGD AGSSRFYLSM EDSLMRIFAS
DRVSGMMKKL GMEEGEAIEH PWVSRAIENA QRKVEARNFD IRKQLLEFDD VANDQRQVVY
AQRNELMDAE SIEDTIQNIQ DDVIGAVIDQ YIPPQSVEEL WDIPGLEQRL HQEFMLKLPI
QEWLDKEDDL HEESLRERII TAWGDAYKAK EEMVGAQVLR QFEKAVMLQT LDGLWKEHLA
AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FQQLLNTLKH DVISVLSKVQ VQAQSDVEEM
EARRREEDAK IQRDYQHAAA ESLVGGGDEH EAVTAQAPMI RDGEKVGRND PCPCGSGRKY
KQCHGKLS