Gene Shew185_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0406 
SymbollpxC 
ID5372064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp455842 
End bp456762 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content47% 
IMG OID640828605 
ProductUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 
Protein accessionYP_001364638 
Protein GI152998957 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.04832e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTTC AAAGAACTGT TCAGAAAATG GTGAAAACTA CTGGTGTCGG ATTGCATTCT 
GGCAACAAGG TCACTTTGAG CATAATGCCC GCGCCCGTTA ATTCAGGGAT CGTACTCGTG
CGCACTGATT TGAGTCCTGC CGTCGCCATT CCAGCGAAGG CGGAGCAAGT TCGTGAAACC
ACTATGTGTA CGGCACTTGT CAATGACGAA GGTATTCGTA TCTCGACCAT TGAGCATTTA
TTTGCAGCAC TTGCGGGTTT AGGCATAGAT AACGCCGTAA TCGAAGTGGA CGCGCCTGAA
ATTCCTATTA TGGATGGCAG TGCGAGCCCA TTTGTCTTCT TATTGCAGTC TGCGGGTATT
AAAGAGCAGG CCGCACCTAA GAAGTACTTA AAGATTAAGC GCCCTGTGCG TGTTGAAGAT
GGCGACAAAT GGGCCGAGCT GAAACCCTTT AAAGGTTTTA GAGTCAATTT TAAAATTGAC
TTCGCGCACC CAGAAATCGC TCGTAGCCAA CAGCATGTGG TGATGGACTT TTCAACGTCT
GCTTTCGTGA AAGATATCAG CCGCGCCCGT ACTTTTGGGT TTATGCGTGA TATCGAATAT
CTGCGAGCCA ACAACCTAGC GTTGGGCGGC AGCATGGAAA ACGCAGTTGT ACTTGATGAA
TATCGCGTCC TTAATCCCGA CGGCCTGCGT TATGAGGACG AATTTGTTAA GCACAAAATT
CTAGATGCGT TTGGTGATTT ATATGTGGCA GGACACGCTA TTTTAGGTGA GTTCACTGCG
TATAAAACCG GTCATGCACT GAACAACCAA TTGGTGCGTG CTTTACTGGC GCAACAGGAT
GCGTGGGAGT TGGTCAGCTT TGAAAAAGAA GCCGATGTTC CCGTTAGCTT TACCGTGCCA
GGTGGCGCTG TATTTGCTTA A
 
Protein sequence
MIFQRTVQKM VKTTGVGLHS GNKVTLSIMP APVNSGIVLV RTDLSPAVAI PAKAEQVRET 
TMCTALVNDE GIRISTIEHL FAALAGLGID NAVIEVDAPE IPIMDGSASP FVFLLQSAGI
KEQAAPKKYL KIKRPVRVED GDKWAELKPF KGFRVNFKID FAHPEIARSQ QHVVMDFSTS
AFVKDISRAR TFGFMRDIEY LRANNLALGG SMENAVVLDE YRVLNPDGLR YEDEFVKHKI
LDAFGDLYVA GHAILGEFTA YKTGHALNNQ LVRALLAQQD AWELVSFEKE ADVPVSFTVP
GGAVFA