| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0399 |
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| Symbol | murD |
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| ID | 5370184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 447246 |
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| End bp | 448565 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640828598 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001364631 |
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| Protein GI | 152998950 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAATC AGTATTCACA CATAGTGTTA GGTTTAGGGG CAACGGGTTT GTCCGTCGTA
CGCTATTTGT GTGGAAAGGG CATTACGCCA TTAGTGATGG ACAGTCGTCG GCAGCCTCTG
GGCGCCGAAA CATTAGCGAC GTCTTTTCCT GATGTGAAGC TGATTTCTGG CGGATTCGAT
TGCCGTTATC TCGTGCAAGC GACGCAGATC ATTATCAGTC CCGGCATTGC CACTTATACC
CCAGAGGTGC GTGCCGCTGT GGATATGGGC ATCGAAGTGA TTGGCGATGT GGAGCTATTT
GCCCGTGAGA TTGCTGACCG TAAACCTTGC GTTATCGGTA TTACTGGCTC TAACGGTAAA
TCAACTGTCA CTACGCTTGT AGGCGAAATG GCAAGGGAAG CGGGTATCGC CGTTGCCGTT
GGTGGCAATA TTGGTGTGCC TGCGCTGGAT TTACTGCATG AAAATGCTGA CTTATTTGTG
CTTGAGTTGT CGAGCTTTCA ACTGGAAACC ACCCATAGCC TTAAGTGTGT GGTGGCGACC
TGTTTGAATA TCAGCGAAGA CCACATGGAC AGATACAGCG ATATCGCTGC CTACCGCGAA
GCTAAATTAC GTTTATACAA ACAAAGCCGC GCCGTTCTGT TTAATCGCGA CGATAAACTG
ACCGTACCGC CAGAGCCAAT GAACCAAAAC AGTTTTGGTT TAGCTGCGCC AGAAGCGGAT
GAATGGGGTA TCAGCGACAG CAAGATTTAT CACGGCAGCA GCGAAATCAT GCCGATCACA
GAAGTCTCCC TGATTGGTAG CCATAACCAT GCCAACCTAC TCGCAGCAAT GGCGCTTGTG
GATGTTGTCG GTGTTGATAA ACAGATTATG GCAAAAGTGG CGCGTAGCTT TACCGGCTTA
TCCCATCGCT GTGAAGTGGT TGGGATTAAG AATGGCGTGA CCTATGTCAA TGACTCGAAA
GCGACGAACG TCGGTGCCAC CGTTGCCGCG CTCGATGGTT TGAGTGATCA CTTAGGCGAT
ATTATTTTGA TTGCTGGCGG TGACGGTAAA GGTGCTGATT TTAAACCTTT AGGCGTGGCG
TTAGCGAAAG TGACACATCT CATTACCTTA GGTCGCGATG GCAAAAAGAT TGCCGCCTTA
AAAGACGGCG CGGTCAGAGT CGAGACTATG GCGGCAGCGG TAACGAAAGC CGCTGAATTG
GCGACCTCTG GCGATATCGT TTTATTGTCG CCAGCCTGTG CCAGTTTAGA TATGTACAGT
AACTTTATGG CTCGAGGTGA CGATTTCAGA AACCTTGTGG AGCAACTCAA TGGCGAGTGA
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| Protein sequence | MQNQYSHIVL GLGATGLSVV RYLCGKGITP LVMDSRRQPL GAETLATSFP DVKLISGGFD
CRYLVQATQI IISPGIATYT PEVRAAVDMG IEVIGDVELF AREIADRKPC VIGITGSNGK
STVTTLVGEM AREAGIAVAV GGNIGVPALD LLHENADLFV LELSSFQLET THSLKCVVAT
CLNISEDHMD RYSDIAAYRE AKLRLYKQSR AVLFNRDDKL TVPPEPMNQN SFGLAAPEAD
EWGISDSKIY HGSSEIMPIT EVSLIGSHNH ANLLAAMALV DVVGVDKQIM AKVARSFTGL
SHRCEVVGIK NGVTYVNDSK ATNVGATVAA LDGLSDHLGD IILIAGGDGK GADFKPLGVA
LAKVTHLITL GRDGKKIAAL KDGAVRVETM AAAVTKAAEL ATSGDIVLLS PACASLDMYS
NFMARGDDFR NLVEQLNGE
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