Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0389 |
Symbol | |
ID | 5369743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 435510 |
End bp | 436859 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640828588 |
Product | aromatic hydrocarbon degradation membrane protein |
Protein accession | YP_001364621 |
Protein GI | 152998940 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2067] Long-chain fatty acid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAC GTCTTCTGAC TTTGGCTGTC ACTGCAGCCT TGTTAAGTTC AACGACTCAA CTCCATGCCG CTGGTTTTCA ATTAGCCGAA TATTCTGCCA CAGGCTTAGG CCGCGCCTTT GCCGGTGAAG CGGCTATGGC GGATAACGCT TCGGCTCAAG CACGTAATCC AGCCATGTTG ACTTATCTCG AAGGTCGTCA GTTATCGACG GGTGGTATTT ATGTCATGCC AAACGTCGAT GTGACTGGCG ATGTCAGCAT TAGCTCGCCG TTGCTTGGCC CAGATCCTGT TGTTATGAAA GGTGGCGATG CACTGGATGT GGCCGATGAC GCACTGGTGC CAAATTTTTA CTACTCAAAT CAGTTAAATG ATCAATGGAC TTGGGGCCTA GCGGTAAATT CTAACTATGG TCTAGCCACT GAATTACCTG CGACTCATGC CGCGGCTATT TTTGGTAACA AGACTTCGGT TACAACCGTT GAGTTTAATC CAAACATCGC TTATCGCATC AATGATGCAG TTAGCGTCGG TGCTGGTGTA CGTATCGTTT ATGGTGAAGG CGAAATTGGT GCGTCATTAC CCGGTTGGGT CGATGGTATC AAACCGGCTC TGCCGGCTCC CGTGCAGGCA ATGTTACCTC CTGGTGGCAC TGAGCTGAAA AGCATGAAGG GTGATGATGT GGGTTACGGC TGGCAGTTAG GTGCAAGCTG GCAGATCAAT CCGGCTCACC GTTTAGGCTT TGCGTATCAC AGCGGCGTGC AATTGGACTT AGATGGTCAT GCTTCTGGCG TCTTGTATAC CGGTGGTCAA GACGTGTCTA TTGAAGGTTA TTTACCACTT GAATTACCCG CCTTTGCAGA AATTGCTTCC CACCACCAAT TGACCGATAA CTGGGCCATG CACGCGAGCG TGAACTGGAC CGATTGGAGT GTATTTGATC AGCTGGTGGC TTATTTCCCC GGTGACGTTA AACCTAAGGG CGATTTAGAG TCTGATTTAG TTAAAGAAGA GCACTTTGAA GATAACTGGC GTTTCGCGCT GGGAACCACT TATCAAGTGA ATAATGACTG GTTAGTGCGT GCCGGTGTTG CTTTAGACAA AACGGCAGCA AATGACGAGT GGCGCACAAC TACAATTCCA GACTCTGACC GTCTGTGGTT CTCTGTCGGC GCCGGTTATC AGGCGACTAA GAATCTGAAC GTTGATTTCG CTGTGACGTA TATCAAAGCA ACTGGCGATG CGCCAATCAA CGAACAGCAA AACCTACTGG GCTTAGCGGC CGTTAACTTT AACGGTGAAG CGAGCGGCGA TGTGTGGCTT GCGGGTATCC AGATGAGCTA TAAGATGTAA
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Protein sequence | MQKRLLTLAV TAALLSSTTQ LHAAGFQLAE YSATGLGRAF AGEAAMADNA SAQARNPAML TYLEGRQLST GGIYVMPNVD VTGDVSISSP LLGPDPVVMK GGDALDVADD ALVPNFYYSN QLNDQWTWGL AVNSNYGLAT ELPATHAAAI FGNKTSVTTV EFNPNIAYRI NDAVSVGAGV RIVYGEGEIG ASLPGWVDGI KPALPAPVQA MLPPGGTELK SMKGDDVGYG WQLGASWQIN PAHRLGFAYH SGVQLDLDGH ASGVLYTGGQ DVSIEGYLPL ELPAFAEIAS HHQLTDNWAM HASVNWTDWS VFDQLVAYFP GDVKPKGDLE SDLVKEEHFE DNWRFALGTT YQVNNDWLVR AGVALDKTAA NDEWRTTTIP DSDRLWFSVG AGYQATKNLN VDFAVTYIKA TGDAPINEQQ NLLGLAAVNF NGEASGDVWL AGIQMSYKM
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