Gene Shew185_0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0373 
SymbolslmA 
ID5370304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp418307 
End bp418900 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content46% 
IMG OID640828572 
Productnucleoid occlusion protein 
Protein accessionYP_001364605 
Protein GI152998924 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0485263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAA GCCCAAAAAT TAATCGTCGT GAACATATTT TGCAATGTCT AGCACAGATG 
CTAGAAACCA ACCCAGGACA AAGGATCACC ACAGCGAAAC TGGCCTCAGA AGTCGGTGTA 
TCGGAAGCCG CCCTGTACCG TCACTTCCCG AGTAAAGCAC GGATGTTCGA AGGCTTAATC 
GAATTTATCG AAGAGTCGTT ATTGTCGCGC ATCAATTTAA TCATGGATGA CGAAAAAGAC 
ACCATGAAGC GCTGCCAACT CGTGCTGCAA CTGTTGCTGA TTTTTGCCGA GCGTAACCCA 
GGTATTTCCC GCGTCCTCAA TGGTGATGCG CTGCTCGGAG AAAACGAGCG TCTGCGCAGC 
CGCATTAGTA ATTTATTTGC CAAAATTGAA ACCCAGTTGA AGCAAATACT ACGGGAAAAA 
ACCCTGCGGG AAGGCAAAGG CTTCAACTTA GACGAAGCCA TATTAGCCAA TTTACTGTTA 
GCCTTTGCCG AAGGGCGAAT CGCTCAATTT GTACGAAGTG AATTCAAACT CAAACCTACC 
ACACACTTCG ATGAACAGTG GCGTTTTATC CAACATCAGC TTTTACAAAG CTAA
 
Protein sequence
MAVSPKINRR EHILQCLAQM LETNPGQRIT TAKLASEVGV SEAALYRHFP SKARMFEGLI 
EFIEESLLSR INLIMDDEKD TMKRCQLVLQ LLLIFAERNP GISRVLNGDA LLGENERLRS 
RISNLFAKIE TQLKQILREK TLREGKGFNL DEAILANLLL AFAEGRIAQF VRSEFKLKPT 
THFDEQWRFI QHQLLQS