Gene Shew185_0337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0337 
Symbol 
ID5370218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp378900 
End bp380264 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content51% 
IMG OID640828537 
Productaconitate hydratase 
Protein accessionYP_001364570 
Protein GI152998889 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGC TACTCAAAAA CTGGTTAACC CAAGGGCCAT TTGCCCAACA ACTGATCAGC 
TTTAATCACC ACGACATAGT CACAGGTGCA TTATTTACCA ATCAGGTGGC GTATTTTTAC
GAGCAACTGC TCGCCGCGCC CGAGAAAAAA TGGCTGCTCG CGAGTGATAC CAGCGATCTG
TTTGCCGTTG GATTATGTGC CGCGCTGTTA GCGGGCAAAG AAATTATCCT GCCTCCCAAC
ACCCAAACCG GCACCTTGAG CGAGTTAACG CACCAGTTTG ATGGCATCTT GTCAGACAAG
CCTTTGTGCG AATGCCAAGC TTTTGTGCTG CTGAAAAAGG AACTGAGCCT GCCCAACAAA
CCTTGGCCCG CGAGCGAGGC TATCGGCGAG TTAGTGCTAT TTACCTCTGG CAGCAGCGGC
GAACCTAAGG CGATCCGTAA AACACTTGAA CAGTTAGATG TCGAAGTGTC TGTACTCGAA
CATACTTTTG CCGAGCATTT GCCCCATTGC AGTGTGGTAT CCACGGTTTC CCACCAGCAT
ATTTACGGTC TATTATTCAA GATTTTGTGG CCGCTCGCCG CCAGTCGACC GTTTTTAAGC
GAACAGATTG AATACCCAGA AACCCTAAGT TATTACACTG CCTTGCTGCC AAACCTATGT
TTGATCAGTA GCCCAGCCCA GTTATCGCGC CTGCCTAAAG CGCTAGAGCA CGAGCGGCAA
CTGCGCTCAC CGAGCTTAGT TTTTAGCTCT GGCGGTCCAT TAAGTTGTGT CGCGGCCAAA
GGCGTCAACC AGTGCTATGG TCACCTGCCC ATCGAAATTT TTGGTAGCAC CGAAACCGGC
GGCATCGCCT ATCGCCGTCA GCATGAGGCC GATGAACCTT GGCAAGTGTT TGACCGCATC
TCAATAGATC AAGATCCGAC CGACGGCGCC CTGCTGCTAA AATCGCCCTA TTTGGCCGAC
GATGAATGGC TGCGCTGCGA AGATAAAATC GAACCAACCG AAAATGGCCA GTTTAGACTC
AAGGGCCGAC TCGATCGCAT CGTTAAGATT GAAGAGAAGC GTCTGTCGCT AGCGCAAATG
GAAACCCTCA TGTGCAGCCA CGCCTACGTT GAGCAAGCTG CACTAGTCGT GCTGCCACAG
TTTAAATCCC AACTTGGCGC AGTGGTGACC TTGTCAGAAC TCGGTAAAAA CGTGCTGCAA
GAACAGGGCA AACTCAGTAT TAACAATGCC CTAAAAGCAC ATTTACTGAC CCAATTTGAG
CGCGTCACCC TGCCACGCCG CTGGCGTTAT CCCGATATTT TACCGCTTAA CACTCAGGGT
AAGCGTGTCA CTGCCCAGTT AGTCGAGTTA TTTGATCATG ATTAA
 
Protein sequence
MTQLLKNWLT QGPFAQQLIS FNHHDIVTGA LFTNQVAYFY EQLLAAPEKK WLLASDTSDL 
FAVGLCAALL AGKEIILPPN TQTGTLSELT HQFDGILSDK PLCECQAFVL LKKELSLPNK
PWPASEAIGE LVLFTSGSSG EPKAIRKTLE QLDVEVSVLE HTFAEHLPHC SVVSTVSHQH
IYGLLFKILW PLAASRPFLS EQIEYPETLS YYTALLPNLC LISSPAQLSR LPKALEHERQ
LRSPSLVFSS GGPLSCVAAK GVNQCYGHLP IEIFGSTETG GIAYRRQHEA DEPWQVFDRI
SIDQDPTDGA LLLKSPYLAD DEWLRCEDKI EPTENGQFRL KGRLDRIVKI EEKRLSLAQM
ETLMCSHAYV EQAALVVLPQ FKSQLGAVVT LSELGKNVLQ EQGKLSINNA LKAHLLTQFE
RVTLPRRWRY PDILPLNTQG KRVTAQLVEL FDHD