Gene Shew185_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0315 
Symbol 
ID5373330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp357653 
End bp358606 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content50% 
IMG OID640828515 
Productalpha/beta hydrolase fold 
Protein accessionYP_001364548 
Protein GI152998867 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01249] proline iminopeptidase, Neisseria-type subfamily 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0142975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAT CCTTTCCCCC TTTTATCCGC CGCGACTGGT TTAGCGTTGG CAATGGTCAG 
CAATTACATC TGGCGCAATA CGGTAATCCT CAAGGTATCC CGCTGTTGTA TTTGCACGGT
GGTCCGGGAG CGGGTTGTGA TATCGGTGAT TTAGCTTTAT TTAATGGCGA ACAATATTGG
ATTTTGCTGT TAGATCAACG AGGTTCTGGA CAATCCTTGC CCTTTGGCGA TTTAGCCCAT
AATCATCTTA ATGGTTTGAT CTGCGATATG GAGGCGATTC GCCTTGCGTT AGGTATTGAG
CGCTGGTGTT TAGCGGGTGG CTCCTTTGGG GCCACATTAG GCTTAATTTA CAGCGGATTA
TTTCCCGAAC GGGTGATAGC GCAAGTGCTG TGGGCGTTAT TTATTCCGTC TAAAGAAGGC
ATAGATTGGC TCTATGGCGC TGATGGCGCG GCAAAATTAC AACCTGCGGC TTATCGACTC
TTCAGTGGCA ATGCGCCTGT TGTGCCATCG CTGACTGAAC TGCTGGATTT ATATCATCTA
GGTTTGGCAT CGGCCGATGA AAACCTGCGA CACCATTTTG CGCGGCGTTG GGTGCAGTGG
GAGCTAAAGC TCGCGGGGGC GAGATTGGTG TTGCCAAGAC AGTTACCCGA CCCAGTATTA
GCGTTAGCGG ATATCGAATT GCACTTTGCT CGGCATGCTT ACTTCAATGC CATGACTGTG
TTGCAGCGCG TGACGCCTAG GGTGAAGGCG CGTAGTGTGT TATTGCAAGG AATGCAGGAT
GCGATTTGCC CAGCGGCGCT ATTGCGCGAT TTTGTGGCTG GGCTAGAGCA TGCTATTACG
ATTCAATCTG TTGCCGACGG CGGACATATG CTCAATAGCG AGCCGTTGTT TTTGGCGGTC
ACAGCAGAAA TCCATGCTAT GTGGTCGTGG ATACATCAAA GGGAAATACA ATGA
 
Protein sequence
MPESFPPFIR RDWFSVGNGQ QLHLAQYGNP QGIPLLYLHG GPGAGCDIGD LALFNGEQYW 
ILLLDQRGSG QSLPFGDLAH NHLNGLICDM EAIRLALGIE RWCLAGGSFG ATLGLIYSGL
FPERVIAQVL WALFIPSKEG IDWLYGADGA AKLQPAAYRL FSGNAPVVPS LTELLDLYHL
GLASADENLR HHFARRWVQW ELKLAGARLV LPRQLPDPVL ALADIELHFA RHAYFNAMTV
LQRVTPRVKA RSVLLQGMQD AICPAALLRD FVAGLEHAIT IQSVADGGHM LNSEPLFLAV
TAEIHAMWSW IHQREIQ