Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0275 |
Symbol | |
ID | 5373339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 315053 |
End bp | 316969 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640828476 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001364509 |
Protein GI | 152998828 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTTA ATAACCTCAC CATTAAGCAG AAAATTCTGC TAACAGTGAC ATTTGCAGTA CTGCTGTCGA CCATACTCGT CGGCGTATTA AGCCAACGTA GCGCTAAAAA TGTCGTACAA CAACGGATGT TAGGTTCGGA ACTGCCGAGT TTGATGATGC AGATCCGCAA TAAGATCGAT CTCGACATCT CCACTTTAAT GAATGCCGCA GAGCAATTGG CCAGCAGCCG CATGTTACTC CAATGGCTCG AAGATGGCAG ACCACAGGCC CAAGAAACCC AAGTGGTTGC CCAACTGAAA GACATCACGC GTCAATATAA GCTAGCGCAA GCCTCCTACG CCGACAGACA AACTGCCGCC TACTACACTC AGGATGGATT TTTGCGCGTG CTCACCCCTG CGCAGGATGG CTGGTTTTTT GGTTACCGCG ACAGTGGCCA AGAACGTATG TTGAACGTAT TCACTGAGGC CAACGGCGAA GTCAAACTCT TTATCAACTA CCAGCAACCC AATGGTCGCG GCTTAGTCGG GCTCGCTAAA TCACTCGATG ATATGGTGCG TTTACTGAGT TCATTTAAGA TTGAAGAAAC AGGATTTGTT TACTTAGTGG ATGCTAAGGG TGAAGTGAAA CTCCACCCAG ATACGAGCCA AATTGGTAAG AGCAACCTAA GCAACTTATA CAAAGATGCG AACTCAAGCG CCTTACTAAA CCGCGGTGAT TTCAATCTGA TCAATACCAA GATCAATGGC GAAAACATGC TGGTTGCCAG TAGTTATATC GCGTCTATGG ATTGGTACTT AGTGGCACAA GTGCCAGAAG CCGAAGTGTT TGCGCTATTA ACCGAAGCGG CTTATCAGAT CTTAATCTGG ACACTGTTGA TTGCAGCGGG CTTTATCGTC CTCGCTATCG TTGTTGCAGG TTCTGTGAGT CGTCCAATCG CCCAAGTTGC CGCTATGTTC CGCGACATAG GCGAAGGTGA AGGTGACTTA CGCCAACGCT TACCCGTCAA TGGTGAAGAT GAGATTGCGC AACTCGCTAA GGGATTTAAC AGCTTTATCA GCAAGATCCA AGATTCGGTC ATCGAAGTGG CGCAAACCAG CGAACAGCTC GGTTTCTCCG CTAAGGATGT GTCGAATCAG GCACAGCAAA CCTTAGAAGA CAGCCACGAG CAGAAAGATC GCACTATGAT GGTGGTAACA GCCATTAATG AAATGGGCGC GACGGTTAAC GAAATTGCCA GTAATGCTGC CCAAGCAGCG GTTGCAGCAA GAGATGCTGA CACTGAAGCC AGCAGTGGCC AAGTTGTGGT AACCCGTGCC CGCGATACCA TTAACCAATT GTCAAAAGAC GTTGGCCAAG TGGGTGAAGT GATTGAGTCC CTCGCGACCC ACACTAAATC CATTGGTGGG ATTTTAGATG TGATCCGCGC TATCTCTGAA CAGACAAACT TGTTAGCCCT CAACGCGGCA ATTGAAGCGG CACGTGCCGG TGAAGCTGGA CGCGGTTTTG CTGTCGTCGC CGATGAAGTA CGTAACTTAG CATCACGTAC CGCAGCATCG ACCAATGAAG TGCAAGGCAT GATCGACAAG TTGCAATCTG AAGCCAGCCG CGCAGTGAAT GCGATGGCCC AGAGTCGTAC TCGCTCCCAT GAAGGTGTTG TGGCCGTCGA TGAAGCCAGC AAATCGTTGA TTGGTATTAG CGATCGCATT GGTCTTATCA GCGACATGAA CATCCAAGTT GCTGCGGCAA CGGAAGAACA ATCCACAGTT GTGGAGGACA TCAACCGTAA CGTCACAGAA ATCAACGATA TTACTCAGCG TACAGCCAAT ACTGCACAAG CGGCAGCACA GGCGAGTTTA GCCTTGAATC AACTGTCACA CCGTTTAGAT ACCTTAGTGG CCAAGTTTAA GGTGTAA
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Protein sequence | MIFNNLTIKQ KILLTVTFAV LLSTILVGVL SQRSAKNVVQ QRMLGSELPS LMMQIRNKID LDISTLMNAA EQLASSRMLL QWLEDGRPQA QETQVVAQLK DITRQYKLAQ ASYADRQTAA YYTQDGFLRV LTPAQDGWFF GYRDSGQERM LNVFTEANGE VKLFINYQQP NGRGLVGLAK SLDDMVRLLS SFKIEETGFV YLVDAKGEVK LHPDTSQIGK SNLSNLYKDA NSSALLNRGD FNLINTKING ENMLVASSYI ASMDWYLVAQ VPEAEVFALL TEAAYQILIW TLLIAAGFIV LAIVVAGSVS RPIAQVAAMF RDIGEGEGDL RQRLPVNGED EIAQLAKGFN SFISKIQDSV IEVAQTSEQL GFSAKDVSNQ AQQTLEDSHE QKDRTMMVVT AINEMGATVN EIASNAAQAA VAARDADTEA SSGQVVVTRA RDTINQLSKD VGQVGEVIES LATHTKSIGG ILDVIRAISE QTNLLALNAA IEAARAGEAG RGFAVVADEV RNLASRTAAS TNEVQGMIDK LQSEASRAVN AMAQSRTRSH EGVVAVDEAS KSLIGISDRI GLISDMNIQV AAATEEQSTV VEDINRNVTE INDITQRTAN TAQAAAQASL ALNQLSHRLD TLVAKFKV
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