Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0255 |
Symbol | |
ID | 5369891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 294692 |
End bp | 295216 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640828456 |
Product | protein of unknown function Spy-related |
Protein accession | YP_001364489 |
Protein GI | 152998808 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000430973 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAT TATCACCTTT GAAAGCGAGC CTGTTTGCCA TTCTAGCGAG TTCTGCGGTT TTAGCGACAA CAGTCAATGC CGAACCGACA GACGGTGGCT GTGATTTCTC CCGTTCTGAA TTCCACAAAG GCGACCGCAT GATGGGCGAT CGTATGGAAC ATGGCGGCCG ACATATGGAT CATGGTGGCA TGCATCGTAT GTTTGAAGGG CTAGATTTAA CCGATGCCCA AAAAGCTGAT ATCAAAAAGC TGTTTGCCGA TCAGAAAGCT GCGCGTGCCG ATAGCCGCCC AACGAAAGAG CAGCGTTTGG CCCATCGCAC TGAAATGCAG GCCTTGATGA CGGCCTCTAA TTTTGATGAA GTGCAAGCCA AGGCACTGAT GAGCGCGCAG CAAGAACAGC GTCAAGCTCA AGCCATTGAA CGTATGAAGC TGCATAATCA AATCTACAAT CTGTTGACAC CAGAGCAGCA AGCTAAGTTT AAAGCGCGAT TTGAAGCACA AGCTGGTAAA GAACCTCGCG GTTAA
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Protein sequence | MKTLSPLKAS LFAILASSAV LATTVNAEPT DGGCDFSRSE FHKGDRMMGD RMEHGGRHMD HGGMHRMFEG LDLTDAQKAD IKKLFADQKA ARADSRPTKE QRLAHRTEMQ ALMTASNFDE VQAKALMSAQ QEQRQAQAIE RMKLHNQIYN LLTPEQQAKF KARFEAQAGK EPRG
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