Gene Shew185_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0255 
Symbol 
ID5369891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp294692 
End bp295216 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content49% 
IMG OID640828456 
Productprotein of unknown function Spy-related 
Protein accessionYP_001364489 
Protein GI152998808 
COG category[P] Inorganic ion transport and metabolism
[U] Intracellular trafficking, secretion, and vesicular transport
[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.30973e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAT TATCACCTTT GAAAGCGAGC CTGTTTGCCA TTCTAGCGAG TTCTGCGGTT 
TTAGCGACAA CAGTCAATGC CGAACCGACA GACGGTGGCT GTGATTTCTC CCGTTCTGAA
TTCCACAAAG GCGACCGCAT GATGGGCGAT CGTATGGAAC ATGGCGGCCG ACATATGGAT
CATGGTGGCA TGCATCGTAT GTTTGAAGGG CTAGATTTAA CCGATGCCCA AAAAGCTGAT
ATCAAAAAGC TGTTTGCCGA TCAGAAAGCT GCGCGTGCCG ATAGCCGCCC AACGAAAGAG
CAGCGTTTGG CCCATCGCAC TGAAATGCAG GCCTTGATGA CGGCCTCTAA TTTTGATGAA
GTGCAAGCCA AGGCACTGAT GAGCGCGCAG CAAGAACAGC GTCAAGCTCA AGCCATTGAA
CGTATGAAGC TGCATAATCA AATCTACAAT CTGTTGACAC CAGAGCAGCA AGCTAAGTTT
AAAGCGCGAT TTGAAGCACA AGCTGGTAAA GAACCTCGCG GTTAA
 
Protein sequence
MKTLSPLKAS LFAILASSAV LATTVNAEPT DGGCDFSRSE FHKGDRMMGD RMEHGGRHMD 
HGGMHRMFEG LDLTDAQKAD IKKLFADQKA ARADSRPTKE QRLAHRTEMQ ALMTASNFDE
VQAKALMSAQ QEQRQAQAIE RMKLHNQIYN LLTPEQQAKF KARFEAQAGK EPRG