Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0239 |
Symbol | |
ID | 5373214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 278919 |
End bp | 279578 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640828440 |
Product | two component transcriptional regulator |
Protein accession | YP_001364473 |
Protein GI | 152998792 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTGC TATTGATTGA GGATGATACC GATCTGGTCG CGCGCCTCAT TCCCGCCCTT AACAAGGCGG GTTATACCGT CGAACACGCC GATAACGGTA TTGATGGCGC CTTTTTAGGC GAAGAAGAAA ACTTCGAAGC CGTGATCCTC GATCTCGGTT TACCCGGCAA ACCCGGTCTA CAAGTCCTCG GCCAATGGCG ACAAAAAGGC TTAGCCATGC CAGTGCTGAT CCTCACCGCT CGCGATGCGT GGCACGAGCG GGTCGATGGC CTCAAGGCGG GTGCCGATGA TTACCTCGGC AAGCCTTTTC ATATTGAAGA ACTACTCGCA AGGCTCGAAG TGTTGATCCG CCGCCACTTT GGCCGCGCCG ACAATGTGTT GCAACATGCG GGCATTTCCC TCGATGTCGA CAAACAAGCC GTCACCAATG TCGACGGTGA AGTGATAGAG CTGACTAAGA TTGAATATCG GCTGCTGCAT TACTTAATGG TCAATCCCAG CAAAATCGTC TCTAAGTCAG AGCTCAGTGA ACGCATTTAC GAAGAAGATC AAATCAAAGA CAGCAATGTC ATCGAAGTGT ACGTCAACCG CCTGCGCCAA CGCCTAGGCA AGGATTATAT CGAAACCCGT CGCGGCCAAG GTTATCGACT CAAGGAGTAA
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Protein sequence | MRLLLIEDDT DLVARLIPAL NKAGYTVEHA DNGIDGAFLG EEENFEAVIL DLGLPGKPGL QVLGQWRQKG LAMPVLILTA RDAWHERVDG LKAGADDYLG KPFHIEELLA RLEVLIRRHF GRADNVLQHA GISLDVDKQA VTNVDGEVIE LTKIEYRLLH YLMVNPSKIV SKSELSERIY EEDQIKDSNV IEVYVNRLRQ RLGKDYIETR RGQGYRLKE
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