Gene Shew185_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0230 
Symbol 
ID5373262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp264291 
End bp265544 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content45% 
IMG OID640828427 
Producttetratricopeptide domain-containing protein 
Protein accessionYP_001364464 
Protein GI152998783 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID[TIGR03142] cytochrome c-type biogenesis protein CcmI 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.73017e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAT TTTGGATTTT TATTGCGCTT GTTATGTTAG TCGGCCTGAT GCTGATTTGG 
ATCCCGCATT TCAGACAGCA GAAGTTGCTG AAAACTGAAG AAGCTGGAGT TCGTAAACAA
ACGAACCTTG AATTGTTCAA TGAGCGCCTA GGCGTTCTTG AAAAAGAATT AAGCGAAGAG
TTACTGGATC AAGCCGAATT CGATGCATTG AAAAAAGAGC TTGAAATCAG TCTACTCCAA
GACATCAAAG AAGCGAGCGA TGATTCACTG GTCAACCAAA TCAAGCCAAA GACGATTCTG
TGGCCGTCGA TCATGTCAGT TTGTTTGATT GTTATCTCAG GCTATCTCTA TCAGCATTTA
GGTGCCTTCG AGAATATTGA AACTGCCCAA CAACCTGCCA ACCCACATGA GGGAATGGAT
ACGGCTCAAA TCATGGCGCA GCGCGTACAG ATGATGGAAG CCCAAGTAAA AGCCGAGCCA
GAGAACAGCC AAGTATGGTT CAGCTTAGGC CACGCTTATG TATCGGCAAA CCAATACGAC
AAAGGGATTG CGGCTTTCGA TAAAGTAATG GATTTAGTCG GAAAACACGC TGAATTATTA
GGTCCTAAAG CAACAGCCAT GTATTACAAA GCGGGCCAGC AAATGACACC GCAAATCCAA
GCGATCATTG ATGAATCTTT AGCGATGGAT GCTCAAGACC CTTCAACACT ATTGCTCGTA
GGAATGGATG CTTTCTTTAC CGCGGACTAC AAAAAAGCTA TCGCATCATG GCAAATCATT
CTTGATAGCG ATCGTGCTGA TGTTGATCGC GCAGCCCTAA TGAATGCTAT CGAAACGGCT
AACTTACGTA TGCAGTCTGA AACGGCTGGC ATGCCAAATG ATGATGCCCA CAAGCAAGTG
AAGGCGAGTG CGACTAAGTC GGTCAATGTG ACTATATCTA TCTCTGCAGA ACTTGCCGCT
AAAGCCAGCC CTGAAGACAC TATCTTTATC TTTGCCCGTG CAACTGAAGG ACCAAAAGTC
CCATTAGCGG CAACCAAAGT CAGTGCTAAG TCGTTCCCAA TTACGGTGAC ATTAGATGAT
AGCAGCGGTA TGGGTGGCGA TAAGAAATTA AGTGACGCTA CCAATGTGGA AGTAATTGCA
GTGCTTTCTA AGCACGGTAA TATCAAACCA CAAGCGGGCG ATCTTCAAGG TAAGATCAGC
ACAGTGGCTG TCGGCGATAC CGCTAACCTA GTGCTTGATA CCCAAGTGCA ATAA
 
Protein sequence
MTTFWIFIAL VMLVGLMLIW IPHFRQQKLL KTEEAGVRKQ TNLELFNERL GVLEKELSEE 
LLDQAEFDAL KKELEISLLQ DIKEASDDSL VNQIKPKTIL WPSIMSVCLI VISGYLYQHL
GAFENIETAQ QPANPHEGMD TAQIMAQRVQ MMEAQVKAEP ENSQVWFSLG HAYVSANQYD
KGIAAFDKVM DLVGKHAELL GPKATAMYYK AGQQMTPQIQ AIIDESLAMD AQDPSTLLLV
GMDAFFTADY KKAIASWQII LDSDRADVDR AALMNAIETA NLRMQSETAG MPNDDAHKQV
KASATKSVNV TISISAELAA KASPEDTIFI FARATEGPKV PLAATKVSAK SFPITVTLDD
SSGMGGDKKL SDATNVEVIA VLSKHGNIKP QAGDLQGKIS TVAVGDTANL VLDTQVQ