| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0230 |
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| Symbol | |
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| ID | 5373262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 264291 |
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| End bp | 265544 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640828427 |
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| Product | tetratricopeptide domain-containing protein |
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| Protein accession | YP_001364464 |
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| Protein GI | 152998783 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000773017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAT TTTGGATTTT TATTGCGCTT GTTATGTTAG TCGGCCTGAT GCTGATTTGG
ATCCCGCATT TCAGACAGCA GAAGTTGCTG AAAACTGAAG AAGCTGGAGT TCGTAAACAA
ACGAACCTTG AATTGTTCAA TGAGCGCCTA GGCGTTCTTG AAAAAGAATT AAGCGAAGAG
TTACTGGATC AAGCCGAATT CGATGCATTG AAAAAAGAGC TTGAAATCAG TCTACTCCAA
GACATCAAAG AAGCGAGCGA TGATTCACTG GTCAACCAAA TCAAGCCAAA GACGATTCTG
TGGCCGTCGA TCATGTCAGT TTGTTTGATT GTTATCTCAG GCTATCTCTA TCAGCATTTA
GGTGCCTTCG AGAATATTGA AACTGCCCAA CAACCTGCCA ACCCACATGA GGGAATGGAT
ACGGCTCAAA TCATGGCGCA GCGCGTACAG ATGATGGAAG CCCAAGTAAA AGCCGAGCCA
GAGAACAGCC AAGTATGGTT CAGCTTAGGC CACGCTTATG TATCGGCAAA CCAATACGAC
AAAGGGATTG CGGCTTTCGA TAAAGTAATG GATTTAGTCG GAAAACACGC TGAATTATTA
GGTCCTAAAG CAACAGCCAT GTATTACAAA GCGGGCCAGC AAATGACACC GCAAATCCAA
GCGATCATTG ATGAATCTTT AGCGATGGAT GCTCAAGACC CTTCAACACT ATTGCTCGTA
GGAATGGATG CTTTCTTTAC CGCGGACTAC AAAAAAGCTA TCGCATCATG GCAAATCATT
CTTGATAGCG ATCGTGCTGA TGTTGATCGC GCAGCCCTAA TGAATGCTAT CGAAACGGCT
AACTTACGTA TGCAGTCTGA AACGGCTGGC ATGCCAAATG ATGATGCCCA CAAGCAAGTG
AAGGCGAGTG CGACTAAGTC GGTCAATGTG ACTATATCTA TCTCTGCAGA ACTTGCCGCT
AAAGCCAGCC CTGAAGACAC TATCTTTATC TTTGCCCGTG CAACTGAAGG ACCAAAAGTC
CCATTAGCGG CAACCAAAGT CAGTGCTAAG TCGTTCCCAA TTACGGTGAC ATTAGATGAT
AGCAGCGGTA TGGGTGGCGA TAAGAAATTA AGTGACGCTA CCAATGTGGA AGTAATTGCA
GTGCTTTCTA AGCACGGTAA TATCAAACCA CAAGCGGGCG ATCTTCAAGG TAAGATCAGC
ACAGTGGCTG TCGGCGATAC CGCTAACCTA GTGCTTGATA CCCAAGTGCA ATAA
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| Protein sequence | MTTFWIFIAL VMLVGLMLIW IPHFRQQKLL KTEEAGVRKQ TNLELFNERL GVLEKELSEE
LLDQAEFDAL KKELEISLLQ DIKEASDDSL VNQIKPKTIL WPSIMSVCLI VISGYLYQHL
GAFENIETAQ QPANPHEGMD TAQIMAQRVQ MMEAQVKAEP ENSQVWFSLG HAYVSANQYD
KGIAAFDKVM DLVGKHAELL GPKATAMYYK AGQQMTPQIQ AIIDESLAMD AQDPSTLLLV
GMDAFFTADY KKAIASWQII LDSDRADVDR AALMNAIETA NLRMQSETAG MPNDDAHKQV
KASATKSVNV TISISAELAA KASPEDTIFI FARATEGPKV PLAATKVSAK SFPITVTLDD
SSGMGGDKKL SDATNVEVIA VLSKHGNIKP QAGDLQGKIS TVAVGDTANL VLDTQVQ
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