| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0199 |
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| Symbol | rplB |
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| ID | 5370056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 247924 |
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| End bp | 248748 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640828396 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_001364433 |
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| Protein GI | 152998752 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000102621 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGTTA TTAAGTGTAA GCCAACCTCT CCAGGTCGTC GCCACGTTGT TAAAGTGGTG
AACACTGACC TGCATAAGGG TAAACCCTTT GCTGGCCTGT TGGCGAAAAA ATCTAAAAGT
GGTGGCCGTA ACAATACTGG CCGTATCACT GTCCGTCACG TAGGTGGTGG TCATAAGCAG
CATTATCGTC TAATCGACTT CAAACGCGAT AAAGATGGTA TCCCTGCAAA GATTGAGCGT
CTGGAATACG ATCCAAACCG CACAGCTAAC ATCGCGTTAG TACTGTATGC GGATGGTGAA
CGTCGTTATA TTCTTGCTGC CAAAGGCATG CAAGCTGGCG ATAAGATCCA GTCTGGTGTT
GCTGCCGAGA TCAAAACCGG TAACGCAATG CCACTGCGCA ACATCCCAGT AGGTTCTGTA
GTTCATGCAG TTGAAATGAA GCCTGGTAAA GGTGCTCAGA TCGCTCGTTC TGCAGGTGCT
TATGTACAAG TTGTTGCTCG TGATGGCGCA TATGCCACTC TACGTCTTCG CTCTGGCGAA
ATGCGTAAAG TGCCAGTTGA TTGCCGCGCG ACATTTGGTG AAGTTGGTAA TGCCGAACAC
ATGCTACGCC AGTTAGGTAA AGCAGGTGCT AAACGCTGGA GAGGCATACG CCCTACAGTG
CGTGGTGTTG CAATGAATCC AGTAGACCAT CCACACGGTG GTGGTGAAGG CCGTACTTCT
GGTGGTCGTC ACCCAGTGAC TCCATGGGGT GTGCCAACTA AGGGTTATAA GACTCGTAGT
AACAAGCGCA CTGACAAGTA CATCGTACGT CGTCGTAATA AATAG
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| Protein sequence | MAVIKCKPTS PGRRHVVKVV NTDLHKGKPF AGLLAKKSKS GGRNNTGRIT VRHVGGGHKQ
HYRLIDFKRD KDGIPAKIER LEYDPNRTAN IALVLYADGE RRYILAAKGM QAGDKIQSGV
AAEIKTGNAM PLRNIPVGSV VHAVEMKPGK GAQIARSAGA YVQVVARDGA YATLRLRSGE
MRKVPVDCRA TFGEVGNAEH MLRQLGKAGA KRWRGIRPTV RGVAMNPVDH PHGGGEGRTS
GGRHPVTPWG VPTKGYKTRS NKRTDKYIVR RRNK
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