Gene Shew185_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0195 
SymbolrpsJ 
ID5369759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp246002 
End bp246313 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content45% 
IMG OID640828392 
Product30S ribosomal protein S10 
Protein accessionYP_001364429 
Protein GI152998748 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.45818e-13 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACC AAAGAATCCG TATCCGCTTA AAGGGATTTG ATCATCGCTT AATTGATCAA 
TCTACAGCGG AAATCGTTGA AACTGCTAAG CGTACAGGCG CTCAAGTACG TGGTCCAATT
CCACTACCTA CGCGTAAAGA GCGTTATACC ATTTTGATCT CTCCGCACGT TAATAAAGAT
GCTCGTGACC AGTACGAATT ACGTACACAC AAGCGCCTGG TTGACATCGT AGAGCCAACT
GAAAAGACTG TAGACGCGTT AATGCGTTTA GATCTTGCTG CTGGTGTCGA CGTACAGATT
AGCTTGGGTT AA
 
Protein sequence
MQNQRIRIRL KGFDHRLIDQ STAEIVETAK RTGAQVRGPI PLPTRKERYT ILISPHVNKD 
ARDQYELRTH KRLVDIVEPT EKTVDALMRL DLAAGVDVQI SLG