Gene Shew185_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0184 
Symbol 
ID5373389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp229549 
End bp230100 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content44% 
IMG OID640828381 
ProductNusG antitermination factor 
Protein accessionYP_001364418 
Protein GI152998737 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000410017 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAG CTAAAGAAGC TAAAAAAAGA TGGTATGTAG TGCAGGCATT CTCAGGCTAT 
GAAGGCCGAG TTTGTAAGTC ACTGATTGAA TACATTAAGA TGCACGGCAT GGAAGAGTAC
TTCGGTGAGG TATTGGTTCC GACTGAAGAA GTCATTGAAA TGCGTGCAGG TCAGCGTCGC
AAGAGCGAAC GTAAATTTTT CCCTGGCTAT GTTTTAGTCC AGATGGAAAT GAACGATGAC
AGCTGGCATT TAGTCAAAAG CATCCCGCGT GTTTTAGGCT TTATTGGCGG AACGTCTGAT
CGTCCTGCCC CAATTTCAGA TAAAGAAGCG GATGCAATTC TGCGTCGCTT ACAAGAAACG
ACAGCGTCAC CGACTCATAG AACCATATTT GAGCCAGGTG AATTGGTTCG TGTGTGTGAT
GGTCCATTTG CTGACTTTAA CGGTACCGTT GAAGAAGTGG ATTATGACAA GAGCCGCGTA
AAAGTATCAG TAATGATCTT TGGTCGTTCT ACGCCTGTTG AACTTGACTT CAGTCAAGTT
GAAAAAGGCT GA
 
Protein sequence
MTEAKEAKKR WYVVQAFSGY EGRVCKSLIE YIKMHGMEEY FGEVLVPTEE VIEMRAGQRR 
KSERKFFPGY VLVQMEMNDD SWHLVKSIPR VLGFIGGTSD RPAPISDKEA DAILRRLQET
TASPTHRTIF EPGELVRVCD GPFADFNGTV EEVDYDKSRV KVSVMIFGRS TPVELDFSQV
EKG