| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0178 |
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| Symbol | |
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| ID | 5373622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 217314 |
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| End bp | 217778 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640828366 |
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| Product | RNP-1 like RNA-binding protein |
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| Protein accession | YP_001364412 |
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| Protein GI | 152998731 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000203464 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAAGT CATTTCTTAT TGTTTTGATT GTCGCCATTG TTGGCGCCTT TGTGCTATTT
CAGTTTGCAC CTACGCTGCC GGCTTATATT GCCTTCGTTG CAGGCGTTAT TGTGACTAGC
CTTATCTTTA AACTTGTTCC AGAGACTTCA TCATCTCATG CTACAGAAGA ACAATATGTT
GGTCCTACTA TGACCTTATA TGTAGGTAAC CTGCCTTATC GTGTCCATGA AGGTGAAGTA
AAAGTATTGT TTGGTGAGTT TGGCCCAGTA AACTCTGTGC GTTTAGTCAG AGATCGTAAG
ACTGGTCGTC GTAAAGGTTT TGGTTTTGTG GAGATGTCAG AGTCTGGCGC TCAGAAAGCC
ATGGTTAAAC TGAATGACTA TAGCTTCCAA GAAAGAACCT TAAAAGTAAG AGAAGCAAAA
ACACAAGATT CGGAAGCTGC CGACCGTACT GGTACTGACG AGTAG
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| Protein sequence | MQKSFLIVLI VAIVGAFVLF QFAPTLPAYI AFVAGVIVTS LIFKLVPETS SSHATEEQYV
GPTMTLYVGN LPYRVHEGEV KVLFGEFGPV NSVRLVRDRK TGRRKGFGFV EMSESGAQKA
MVKLNDYSFQ ERTLKVREAK TQDSEAADRT GTDE
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