Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0176 |
Symbol | |
ID | 5373101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 215112 |
End bp | 216209 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640828364 |
Product | tRNA (uracil-5-)-methyltransferase |
Protein accession | YP_001364410 |
Protein GI | 152998729 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.148252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTAG CAGCAATGGA TCCTCAGACT TATGATACGC AGTTAGAACA CAAGCGTATC AAGCTAGAAC AAGCCTTTGC CCAATTTGAA ACACCGAGTG TTGAAGTTTT TGCCTCAGAG CCTGCCAACT ACCGTATGCG TGCTGAATTC CGCATGTGGC ATGACGGTGA CGACTTATAC TATTACATGT TCGATAAAGT ATTGAATGAG AAAGTGCGAT GCGATCAATA CTTGCCAGCC AGCGTGCTCA TCAATCAAAT GATGTCGGCC TTAATCGCCG AACTAAAACC GAATCCTAGT CTAAGACATA AACTGTTCCA AGTGGATTTT TTGTCGACCT TAAGCGGCGA GATTTTAGTG TCCTTGCTTT ATCACAGACA GCTTGATGAC CAATGGCGCG CCGATGCGGC TGCACTAAAA ACCAAGTTAA GCAGCCAATT CAACGTCAAT ATCATCGGCC GTGCCCGTAA GCAAAAGATC GATTTAGATA AAGACTTTGT GGTCGAGTCA TTACAAGTGA ATGATAAAAC CTTCTTATAT AAGCAAATCG AGAACAGCTT TACTCAACCC AATGCTAAAG TTTCTGTAAA AATGTTGGAG TGGGCTATCG ATGCGACTCA GGACAGTGAA GGTGATTTAC TCGAACTCTA CTGTGGTAAT GGCAACTTCT CTATCGCACT GGCGCAAAAC TTTAATCGCG TATTGGCCAC CGAACTCGCT AAGCCTTCAG TCGATGCGGC ACAATACAAT ATCGAAGTGA ATGGTATTGA GAATCTGCAG ATTATTCGCA TGTCGGCCGA AGACTTTAGC GATGCCATGG CGAAGAAACG CAGCTTTAGA CGTTTAGAAG GTATCGATCT CGACAGCTAT GTGTGCAACA CCATTTTTGT CGACCCACCA CGCGCAGGGA TTGATCCTGA TACGTTGGCA TTAGTACAAG GTTACGAGCG GATCTTATAT ATTTCCTGCA ACCCTGAAAC CTTAAAAGAC AACCTGCAGC TACTGAACGA AACCCATAAA GTCACTCGCT TCGCCTTGTT TGATCAGTTC CCTTATACCG AACACATGGA AACAGGTGTT CTACTGGAGC GTCGTTAG
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Protein sequence | MNLAAMDPQT YDTQLEHKRI KLEQAFAQFE TPSVEVFASE PANYRMRAEF RMWHDGDDLY YYMFDKVLNE KVRCDQYLPA SVLINQMMSA LIAELKPNPS LRHKLFQVDF LSTLSGEILV SLLYHRQLDD QWRADAAALK TKLSSQFNVN IIGRARKQKI DLDKDFVVES LQVNDKTFLY KQIENSFTQP NAKVSVKMLE WAIDATQDSE GDLLELYCGN GNFSIALAQN FNRVLATELA KPSVDAAQYN IEVNGIENLQ IIRMSAEDFS DAMAKKRSFR RLEGIDLDSY VCNTIFVDPP RAGIDPDTLA LVQGYERILY ISCNPETLKD NLQLLNETHK VTRFALFDQF PYTEHMETGV LLERR
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