| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0173 |
|---|
| Symbol | |
|---|
| ID | 5370937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 211963 |
|---|
| End bp | 213021 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640828361 |
|---|
| Product | selenophosphate synthetase |
|---|
| Protein accession | YP_001364407 |
|---|
| Protein GI | 152998726 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0709] Selenophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00476] selenium donor protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATT CCCCAGTTAC ACTCCCAGAA TCAATCAAAC TAACAGAATA TAGTCATGGT
GCAGGTTGTG GCTGCAAGAT ATCCCCTAAA GTGCTCAGCA CTATCTTGGC CTCGCAGTTA
CCCGTGTTTA CTGATCCTAA TCTGCTGGTC GGCAATCAAA GCCGTGACGA TGCCGCAGTG
TATAAACTCA ATGACGACAT AGGCATCATC AGCACTACCG ATTTTTTCAT GCCGATTGTT
GACGATCCCT TCACCTTTGG CCGCATCGCT GCGACTAATG CGATCAGTGA TATTTATGCC
ATGGGCGGCA CGCCTATCAT GGCGATCGCT ATTTTAGGCT GGCCAATCAA TAAGCTACCT
GCAGAAGTCG CACAACAAGT GGTCGATGGC GGCAGACAAG CCTGTATGGA AGCGGGGATC
ATGCTAGCCG GTGGCCACAG CATAGATGCG CCTGAACCGA TTTTTGGGCT CGCAGTGACA
GGACAAATTG CGTTAACTGA CTTAAAACAA AATGACACTG CTAAAGCGGG CGATCGTTTA
TATCTCACTA AACCTATCGG CATTGGCATT TTAACCACGG CGCAAAAACA GAAAAAACTC
CAAGATGAAG ACAGTCACAT TGCGGTTAAT GCTATGTGCC AGCTGAATAC TATAGGCACG
ACGATTGCCA AAATTAGCGG TGTAAACGCC CTGACCGATG TCACAGGATT TGGACTGGCG
GGACACCTAC TCGAAATGTG CCAAGGTGCC AAGCTCACGG CAAAACTCAA ATTTGATGCG
GTGCCGTTAC TACCACGCGC CTTAGATTAC TTAGCCTTAG GTTGCGTTCC TGGCGGGACT
CACCGAAATT ACGACAGTTA TGGCGAGCAT CTCCCCGAGC TCAGCGAGCA TCAAAAAGCG
ATTCTGTGCG ATCCGCAAAC CAGTGGTGGT CTGTTAGTTG CCGTCTCGGC CGAAGCCGAA
GCGGAATTGA TTGCTCTACT CGATGCGCAT CACATCGCCC CAATTTGCAT TGGATCACTG
GAAACACCCA CCACTGAAGC GAATGTGGTG TTGTACTGA
|
|---|
| Protein sequence | MSDSPVTLPE SIKLTEYSHG AGCGCKISPK VLSTILASQL PVFTDPNLLV GNQSRDDAAV
YKLNDDIGII STTDFFMPIV DDPFTFGRIA ATNAISDIYA MGGTPIMAIA ILGWPINKLP
AEVAQQVVDG GRQACMEAGI MLAGGHSIDA PEPIFGLAVT GQIALTDLKQ NDTAKAGDRL
YLTKPIGIGI LTTAQKQKKL QDEDSHIAVN AMCQLNTIGT TIAKISGVNA LTDVTGFGLA
GHLLEMCQGA KLTAKLKFDA VPLLPRALDY LALGCVPGGT HRNYDSYGEH LPELSEHQKA
ILCDPQTSGG LLVAVSAEAE AELIALLDAH HIAPICIGSL ETPTTEANVV LY
|
|---|
| |