Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0156 |
Symbol | |
ID | 5369419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 185067 |
End bp | 186065 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640828344 |
Product | general secretion pathway protein K |
Protein accession | YP_001364390 |
Protein GI | 152998709 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACCC AATCTCGGTC TAAACAGCGC GGCGTTGCAC TGATCGTCGT GCTCTTGATT GTGGCTATGG TGGTGATCAT CGCGACAAAC ATCACTGGCC GTAATCAGTT ATCTATGCGC CGAACCTTAA ACTTGGCCCA GTACGATCAA GCTTATTGGT ATGCGATTTC CGCCGAAGAA TTGGCGAAGA AGATTTTAAA ACAAGATTTA GATGACTCTG AAGGTCGAGT CCACAGGCAA CAATATTGGG CCATGGCCGA TGTGGTGTTT CCAGCGGAAT ACGGTGAAAT CGCGGGCAAG ATCACCGATA TGCGCGCCTG TTTCAACTTA AATGCCTTGT CCGCGACCAC GAAAGAGGTG GAAAACGGTC AACCTAAGCT GCCCTTGGCG GCGAAGCAAT ATAAGGCCTT GTTGGTGAGT TTAGGGATGG ACGACTTTAG TGCGGATCGC CTGACTCAGA CCTTAAAAGA TTATATCGAC GAAGACATGA CGGCCAGCCC CTACGGCGCC GAAGATGCAG AATATGAATC GCGTAATGTG CCTTACCGTG CGGCCAATAC GCTGATGAAT CATCGCAGTG AGTTACGCGC AGTGATGGGA TACACCCAAG ATATCTATTT GAAACTCTTG CCCTATGTTT GTGTGATCCC AGGCAATGAC ACGCAATTGC TCAACGTGAA TACCGTGGAA GTTGAGCAAG CGGCGCTGTT AGCTGGCATG CTCGATAATC AGATTTCGGT CGGCGAAGCA GAAAGCATTA TCAACCAACG CCCCAGCGAT GGCTTTGCCA AAATCGAAGA TTTTTATGAA AGCTCGTCTA TGGGCTCGAT CAAGTGGGAA GGTGCCATGA AGTCGAGTTT TGTCATCGAT AGCCAATATT TTCTGTTGGC CTCGGGGGCG AAAGTCGATA ACGCCGTGTT TAGAATGGAA AGCGTGCTCA AAAAGGGCGG CGGCAACAAA ATGGAAGTGC TCACCCGTCA GTTTGGTGGC CAAAAATAA
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Protein sequence | MRTQSRSKQR GVALIVVLLI VAMVVIIATN ITGRNQLSMR RTLNLAQYDQ AYWYAISAEE LAKKILKQDL DDSEGRVHRQ QYWAMADVVF PAEYGEIAGK ITDMRACFNL NALSATTKEV ENGQPKLPLA AKQYKALLVS LGMDDFSADR LTQTLKDYID EDMTASPYGA EDAEYESRNV PYRAANTLMN HRSELRAVMG YTQDIYLKLL PYVCVIPGND TQLLNVNTVE VEQAALLAGM LDNQISVGEA ESIINQRPSD GFAKIEDFYE SSSMGSIKWE GAMKSSFVID SQYFLLASGA KVDNAVFRME SVLKKGGGNK MEVLTRQFGG QK
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