| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0151 |
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| Symbol | |
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| ID | 5371178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 181663 |
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| End bp | 182886 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640828339 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001364385 |
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| Protein GI | 152998704 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGCAT TTGAATATAA GGCACTGGAT GCCAAGGGAA AGCAGCTTAA GGGCGTAATC
GAGGCGGATA CCGCCAGACA CGCCCGCAGC CAGTTGCGCG ATCAGCGCAT GATGCCCTTG
GAAATTCTGC CTGTTTCCGA AAAAGAAGCC AAAGCTAAGA GCAGCAGCTT TTCGTTTTTC
AAACGGGGTA TCTCGGTCGC TGAATTAGCC TTGATCACCC GCCAAATCGC GACCTTAGTG
GCCGCGGGTT TACCGATTGA AGAATCCCTT AAAGCCGTTG GTCAGCAATG CGAGAAAGAT
CGCCTTGCGA GTATGATCAT GGCGGTACGT TCGCGGGTGG TTGAAGGTTA CAGTCTGGCC
GATTCCTTGG CTGAATTTCC GCACATTTTC GATGATTTAT ACCGTGCCAT GGTGGCCTCG
GGTGAAAAGT CCGGTCATTT AGAAGTGGTG CTCAATCGGC TGGCGGATTA TACAGAGCGA
CGCCAACAGC TTAAATCTAA GTTGACGCAA GCCATGATTT ATCCTGCGGT ATTGACCACA
GTGGCGATTG GGGTAATTTC CATCCTGTTG GCGGCGGTTG TACCTAAGGT GGTCGGGCAG
TTTGAACACA TGGGCGCCGA GTTACCGGCT TCGACACGCT TCTTGATTTC GGCCTCTGAC
TTTGTCCAAA ACTACGGTGT GTTTGTGGTC ATTGCCCTAG TGATGCTGTT CGCGCTCTTT
CGGCGCATGT TAAAGTCGCC TGCGTTTCGA ATGAAGTACG ACAATTTTTT ATTGAGCATG
CCAGTTGTTG GCCGCGTGAG TAAGGGCTTA AATACGGCGC GTTTTGCACG GACCTTAAGT
ATCTTATCCG CAAGCTCTGT GCCTTTGCTC GACGGTATGC GTATCGCCAG TGAAGTATTG
CAGAATGTGC GAGTACGGGC CGCAGTGGAT GATGCGACTG CGCGGGTGCG TGAAGGAACT
AGCTTAGGTG CGGCATTGAC TAATACTAAG TTGTTTCCGG CAATGATGTT ATACATGATT
GCCTCGGGCG AAAAGAGTGG CCAGCTTGAG CAAATGTTAG AACGCGCCGC CGATAACCAA
GACAGGGAAT TCGAGGGCAA CGTCAATATA GCGTTAGGGG TATTTGAACC TATGCTGGTG
GTGAGTATGG CGTGTGTGGT GCTGTTTATC GTGATGGCGA TTCTGCAGCC AATCTTAGCC
TTGAATAACT TGATTAGCGG TTAA
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| Protein sequence | MPAFEYKALD AKGKQLKGVI EADTARHARS QLRDQRMMPL EILPVSEKEA KAKSSSFSFF
KRGISVAELA LITRQIATLV AAGLPIEESL KAVGQQCEKD RLASMIMAVR SRVVEGYSLA
DSLAEFPHIF DDLYRAMVAS GEKSGHLEVV LNRLADYTER RQQLKSKLTQ AMIYPAVLTT
VAIGVISILL AAVVPKVVGQ FEHMGAELPA STRFLISASD FVQNYGVFVV IALVMLFALF
RRMLKSPAFR MKYDNFLLSM PVVGRVSKGL NTARFARTLS ILSASSVPLL DGMRIASEVL
QNVRVRAAVD DATARVREGT SLGAALTNTK LFPAMMLYMI ASGEKSGQLE QMLERAADNQ
DREFEGNVNI ALGVFEPMLV VSMACVVLFI VMAILQPILA LNNLISG
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