| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0142 |
|---|
| Symbol | |
|---|
| ID | 5373544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 168269 |
|---|
| End bp | 170320 |
|---|
| Gene Length | 2052 bp |
|---|
| Protein Length | 683 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640828330 |
|---|
| Product | peptidase M14 carboxypeptidase A |
|---|
| Protein accession | YP_001364376 |
|---|
| Protein GI | 152998695 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2866] Predicted carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTAT TTTCCCTCTC CGTTATCGCC ATTGCCTGCC TTTCTGCGGG CAGTCTCTAC
TCAGTCGATG CTGTTGCCAA CGAGGCAAAA ACCTTAGCCA AAACAGCTCA AGCATCTACA
GATTTGCCGA CCTCGACTCC AGTCGCTGCG GCGCAAACCG TCACCGACAA AACGCCAGCT
GAAACCCCAG CAACAGCGCC ACAGGATGTA AGCCCTGCTG CGAATACCCA AGCAACCGAA
CCCGCTGCGA CTGTCGCAAC CGATGCCACC ACTGTAGCGC CAGAGCCCGC GCCGATCCCT
GAGCGAGCCA ACACCTTTGT CAACGATGCC ATTTTACCGC CGAGTATCAC TTGGCATGGC
GCCAGCGAAT CGCTCATGTT GAGTGTCGAT AACGAGTGGG CGACGCCGTT TGAACAAAGT
AGTGGTATTG AAAGTCCGAG CTACGAGGCC ACTATCGCTT GGCTCGACAC GCTTGCGGGC
GAAACCGATA AATTACAAAA GGTGAGCTTA GGCAAGAGCC CACAGGGGCG CGATATTTGG
ATGTACATCG CCAGCAGTGA AGGCATTAAT GAGTCGGCAC GCCTCAAGCA AAACACTAAG
CCAACGGTTT TAGTGCAAGC AGGGATTCAT GCCGGAGAAA TTGACGGTAA AGATGCCGGC
ATGATGCTGC TACGTGACAT CGTTAAAGGC GATAAAAGCG CCCTGCTGGA TAAAGCCAAC
CTCTTGTTTG TGCCTATGTT TAGTGTCGAT GCCCATGAGC GCAGCGGCGA ATTTAATCGC
GTGAATCAAC GTGGCCCTGT GAATATGGGC TGGCGCACTA CGGCAAATAA TCTTAACCTT
AACCGCGATT ATGCCAAGGC CGATACCTTA GAAATGCAGC ACATGCTGCG CGCAATCAAC
GTGTGGCAGC CAGACTTGTA TATCGACGTG CATGTCACCG ACGGCATAGA TTATCAATAC
GATGTCACCT TTGGTTATAA CCTTGCCCAA GGGTTAAGCC CAGCCAGTTA CCGCTGGCTC
GAAAACAGCT ACAGACCCGC AGTTGAAGCG GCATTAACCG AGCAAGGCCA TATTCCCGGC
CCGCTGATTT TTGCCGTGGA TAACGCCGAT ATCACCAAAG GCATGTCGCT GTGGAATCCA
AGTCCGCGCT TCTCTAACGG TTATGGCGAT GCCCGCCATT TACCGACTAT TTTGATTGAA
AACCACAGCT TAAAACCCTT TAAACAAAGA GTGCTCGGCA CCTATGTGAT GCTGGAGCAA
ACCCTCAAAA CCGTGGGCGA ACAGGCGACT AAACTGAAGA GTGCGATTCA GGAAGATAAA
TACCGCGCCT CACCGCTGAT CACCCTCACG TGGAAATCGG CGCCGCTGGC AAAAGGTTGG
GACTTTAAGG GCATCGACTA TCAACTCGAA AAGAGCCCCA TCAGTGGCAC TGAGGTGGTG
CGATGGAACG GTCAACCTAA GCTGTACCCC AACTTGCCCG TGATCGCCGA GACTGTGCCA
GATATTAAAG TCACTCGTCC GAGCGCTTAC TATATTCCGG CGCAATGGAC GCAAGTGATT
GATCGCCTGA ACATACATGG CATCCGCATG ACGCGCCTGA CCAAACCGAC AGAGCTTAAA
TTACAGCAAT ACAAACTCAG TAACCCAGTG TTTAACACTA AGGATTTTGA GGGCCATCAA
ACGGTCAAAG CCGAGTCAGA GTTGACGAAA GTCAGCACCA CTCTGCCCGC TGGCACCATT
AAAATCAGCA CAGATCAACC GCTGGGCGAT CTGGCGGTTT TACTGCTGGA GCCGCAATCA
CCAGATTCCT TGCTGCAATG GGGTTTCTTT AATCCTATCT TCACCCGCAC TGAATACATT
GAAGATTATG CGGTTGAGCC GCTGGCGGCC AAGATGCTAA AAGATGATCC TAAGCTGCAA
GCTGAGTTCG ACAAAGCACT GACCAACGCC GAATTTGCCG CCGATCCCGA GGCACGCCTG
CGCTGGTTCT ATGAACGCAG CCCTTACTAC GATAACCGTT ACCTTAAGTA TCCGGTTTAC
CGTAGTCGTT AA
|
|---|
| Protein sequence | MRLFSLSVIA IACLSAGSLY SVDAVANEAK TLAKTAQAST DLPTSTPVAA AQTVTDKTPA
ETPATAPQDV SPAANTQATE PAATVATDAT TVAPEPAPIP ERANTFVNDA ILPPSITWHG
ASESLMLSVD NEWATPFEQS SGIESPSYEA TIAWLDTLAG ETDKLQKVSL GKSPQGRDIW
MYIASSEGIN ESARLKQNTK PTVLVQAGIH AGEIDGKDAG MMLLRDIVKG DKSALLDKAN
LLFVPMFSVD AHERSGEFNR VNQRGPVNMG WRTTANNLNL NRDYAKADTL EMQHMLRAIN
VWQPDLYIDV HVTDGIDYQY DVTFGYNLAQ GLSPASYRWL ENSYRPAVEA ALTEQGHIPG
PLIFAVDNAD ITKGMSLWNP SPRFSNGYGD ARHLPTILIE NHSLKPFKQR VLGTYVMLEQ
TLKTVGEQAT KLKSAIQEDK YRASPLITLT WKSAPLAKGW DFKGIDYQLE KSPISGTEVV
RWNGQPKLYP NLPVIAETVP DIKVTRPSAY YIPAQWTQVI DRLNIHGIRM TRLTKPTELK
LQQYKLSNPV FNTKDFEGHQ TVKAESELTK VSTTLPAGTI KISTDQPLGD LAVLLLEPQS
PDSLLQWGFF NPIFTRTEYI EDYAVEPLAA KMLKDDPKLQ AEFDKALTNA EFAADPEARL
RWFYERSPYY DNRYLKYPVY RSR
|
|---|
| |