Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0097 |
Symbol | |
ID | 5371015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 117636 |
End bp | 119303 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640828285 |
Product | urocanate hydratase |
Protein accession | YP_001364332 |
Protein GI | 152998651 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2987] Urocanate hydratase |
TIGRFAM ID | [TIGR01228] urocanate hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGC GACATGACCC AAGCCGCCGC ATTATTGCAC CGCATGGCAC ACAATTAAGC TGTAAGAGTT GGCTCACCGA AGCGCCAATG CGCATGTTAA TGAACAACTT GCACCCAGAT GTGGCCGAGC GCCCAGAAGA CTTAGTCGTC TACGGCGGTA TCGGCCGTGC CGCCCGCGAT TGGGATTGCT ACGACAAAAT TATCGAAGTC TTACAACGCC TCGAAGATGA CGAAACCTTA TTAGTGCAAT CGGGCAAACC TGTGGGCGTA TTTCGCACCC ATGCCGATGC GCCGCGCGTG TTAATCGCTA ACTCCAACTT AGTGCCACAT TGGGCTAACT GGGAGCATTT CAACGAGTTA GACAAGCTAG GTTTGGCCAT GTATGGCCAG ATGACGGCGG GTTCTTGGAT CTACATTGGT ACTCAAGGCA TAGTTCAAGG TACCTACGAG ACCTTTGTGT CTGTAGCGAA ACAGCACTTT GAGGGTATCT CCAAAGGCAA ATGGATCCTC ACTGGCGGGT TAGGCGGCAT GGGCGGCGCG CAAACGCTGG CGGGCACTAT GGCTGGCTTC TCGGTGTTAG CCTGTGAAGT CGACGAGACT CGCATCGATT TCCGTTTGCG CACTCGTTAT GTCGACAAAA AAGCCACTTC GCTCGATGAA GCATTGGCGA TGATTGAAGC GGCAAACCAA GCTGGCAAGC CTGTATCTGT GGGCTTACTG GCAAATGCCG CCGATGTGTT TGCCGAACTG GTTAAGCGCG GCGTTACCCC TGATGTGGTG ACCGACCAAA CCTCGGCCCA CGATCCATTA AACGGTTATC TGCCGCAGGG TTGGACTATG GCAGAGGCCG CAGCTATGCG TAAAACCGAC GAAGCGGGCG TAGTGAAAGC CGCAAAAGCC TCGATGGCGG TGCAAGTACA AGCCATGCTC GATTTGCAAA CTGCCGGCGC AGCTACCTTA GATTACGGTA ACAACATTCG CCAAATGGCG TTTGAGATGG GCGTTGAAAA CGCCTTTGAT TTCCCTGGCT TTGTACCTGC TTATATTCGT CCGCTGTTCT GCGAAGGTAT TGGCCCGTTC CGCTGGGTGG CCCTGTCTGG CGATCCAGAA GATATCTACA AAACCGACGC CAAAGTGAAA GAACTGATCC CAGATAATCC ACACCTGCAC AATTGGTTAG ACATGGCACG CGAGCGCATC GCCTTCCAAG GTCTGCCTGC GCGTATTTGC TGGGTCGGCT TAAAAGATCG CGCCCGTTTA GCGTTAGCCT TTAATGAAAT GGTCAAAAAT GGTGAGTTGT CGGCGCCCGT GGTGATTGGC CGCGATCACT TAGATTCTGG CTCAGTTGCC AGCCCGAACC GCGAAACCGA ATCTATGCTG GACGGCTCAG ATGCAGTATC CGATTGGCCA TTATTGAACG CATTACTCAA CACCGCCAGC GGCGCAACTT GGGTGTCGCT GCACCACGGC GGCGGCGTCG GCATGGGCTT TAGCCAACAT TCGGGTGTGG TGATTGTGTG TGACGGTACC GATGCGGCGG CAAAACGAGT TGGCCGTGTG CTGTGGAATG ACCCAGCGAC AGGCGTGATG CGCCATGCCG ATGCGGGCTA CGAGATTGCG AAAAACTGCG CCAAAGAGCA GGGGCTCGAC TTACCTATGC AAGAGTAG
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Protein sequence | MDKRHDPSRR IIAPHGTQLS CKSWLTEAPM RMLMNNLHPD VAERPEDLVV YGGIGRAARD WDCYDKIIEV LQRLEDDETL LVQSGKPVGV FRTHADAPRV LIANSNLVPH WANWEHFNEL DKLGLAMYGQ MTAGSWIYIG TQGIVQGTYE TFVSVAKQHF EGISKGKWIL TGGLGGMGGA QTLAGTMAGF SVLACEVDET RIDFRLRTRY VDKKATSLDE ALAMIEAANQ AGKPVSVGLL ANAADVFAEL VKRGVTPDVV TDQTSAHDPL NGYLPQGWTM AEAAAMRKTD EAGVVKAAKA SMAVQVQAML DLQTAGAATL DYGNNIRQMA FEMGVENAFD FPGFVPAYIR PLFCEGIGPF RWVALSGDPE DIYKTDAKVK ELIPDNPHLH NWLDMARERI AFQGLPARIC WVGLKDRARL ALAFNEMVKN GELSAPVVIG RDHLDSGSVA SPNRETESML DGSDAVSDWP LLNALLNTAS GATWVSLHHG GGVGMGFSQH SGVVIVCDGT DAAAKRVGRV LWNDPATGVM RHADAGYEIA KNCAKEQGLD LPMQE
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