| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0090 |
|---|
| Symbol | |
|---|
| ID | 5371060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 109437 |
|---|
| End bp | 111260 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640828278 |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_001364325 |
|---|
| Protein GI | 152998644 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAATC CTGAACACAG TTACTGGCAT GACACGCTTA AAGCCATTCG TCGCTGCGGT
AGAAAACTCA TTGAATTTGA ACTGCTATTT ACCTTAGTGT CGGCGGGTAT TATCGTCCCA
TCTTTTGGCT GGCTACTGCG CCATCTGATC GCCAAAACGG GCAATGTCAC CATAACCAAT
TACGACTTGA TCGCCTTCGC CATGTCTCCC TATGGCTTGC TATTTATGAT CATTACCCTA
TTCAGCAGTT TTACCGTGTT TTTTACCCAG CGTGCTGGGG TCACTATTCT GGCCGCATCA
GGGTTATACG ATATTCCCAT TGGCCCAGTG CGGGCACTGA TTTTCGCCAC GGCGCGCTTA
CCCGTATTCA TTCGACTTGG TAGCATATAT GCGGCTTGCT TACTGCTGCT CAGCGTACCT
TTTATGGGAT TAGGGTATCT CATTTTCAGC GTGTTTCTAC AGGGACACGA CATCAATTAC
TACCTGTATT TCAAGCCAGT AGAATGGTAT TTAGCCTTAT CGAGCATGGC CTTCTTAGCG
TTACTCTATC TGCTTGTTAG CTTATATCTG TGGGCCAAAG CGGCCTTTTC CCTGACGATA
ATTGTCAGTG AAACAACCGA TGCATTAACG GCACTCAAAC GCAGTTGGCA GTTAAGTGCA
GGTAATGAAC GCGCGATTAT GTGGCACGCA GCTGGTTGGT GGTTAAGGAT AGGGGCTTTG
CTGTATCCCT TAATGCTGTT GATCTCATGG GGGGGCGATA GCTTGCTCGA CCGGGTTTCA
CTGACACTTT CGGCAGAATT AGCCATGTTG GCCCTCGTCT CTGCACTGAT TTTTATGCTG
AGTGCAACTT GGTCCTTGCT CGGCATGTTT GGCGAAGCCT TTATCATCTT GCTGTTATAC
CGCCAACTGG GAGAGAAACC TGCAGGGTTA GAACGCCTTG GACGAGAGAC AGTAAAAAAG
ACTTCAGAGC TGTCGATTTA CACTCTAAGT GGCGTCTTGG TCACGACTTT TTTAATTATG
CTGGGACTAG GGGTGTATGC CCTAAACAGT GAGCCACAAA GGGATGAAAT CCTCATTTCA
GCCCACCGAG CGGGGGCAGC TAGGGCACCA GAAAATACCC TTGCGGCTTT GCGTTCAGCG
ATTGCAGAAA AGGCCGATTA TGCTGAAATA GATGTGCAAA CCGCCGCTGA CGGCACCTTA
ATGGTACTGC ACGATGCGGA TTTAATGCGT ATCGCGGGCG ATCCTCGGCG AGTAGCTAAT
CTCAGCGCCA GTGAAATACA ACAACTCGAT GCGGGTCGCT GGCACAGTGC CGCGTTTGCA
GGTGAATCCG TGCCGACGCT ACTACAAATG CTCAATGAGG CGCGCAATAA AATAGGTTTG
AATATTGAGC TCAAATATAA TCAAGCCGAT CCCACCTTAG CGCAGGCTGT TGTTGCCCTG
CTGCAACAAC AAAAAATGAC ACAACAAGTG GTGATTACTT CGCTCGAAGC GAGAGCCATT
GAAGAAGTGC AGCGACTAGA CCCTTCAATC CAAACAGGGC TGATTGTCAC CCAATCTATC
GGCGACCCGA TTAAGTCGAA TGCACAATTC TTAGCGATAA ATCAGTCGAT TACTAATGAG
AAGTTTATCG CCAGAGCCCA TAAGGGCGGC AAGCAAGTGC ATGTATGGAC AGTGAACAAT
CCACGGCAAA TGCTACGCAT GTTAGCACTG GGAGCCGATG TACTGATCAC CGACTATCCA
CAGGAAGCTG TGGAAATACG AGAACAATGG CTATCACTGT CACCCGTTGA GCAGACGGCA
CTGCGTCTAC GTTATGTGCT GTAA
|
|---|
| Protein sequence | MLNPEHSYWH DTLKAIRRCG RKLIEFELLF TLVSAGIIVP SFGWLLRHLI AKTGNVTITN
YDLIAFAMSP YGLLFMIITL FSSFTVFFTQ RAGVTILAAS GLYDIPIGPV RALIFATARL
PVFIRLGSIY AACLLLLSVP FMGLGYLIFS VFLQGHDINY YLYFKPVEWY LALSSMAFLA
LLYLLVSLYL WAKAAFSLTI IVSETTDALT ALKRSWQLSA GNERAIMWHA AGWWLRIGAL
LYPLMLLISW GGDSLLDRVS LTLSAELAML ALVSALIFML SATWSLLGMF GEAFIILLLY
RQLGEKPAGL ERLGRETVKK TSELSIYTLS GVLVTTFLIM LGLGVYALNS EPQRDEILIS
AHRAGAARAP ENTLAALRSA IAEKADYAEI DVQTAADGTL MVLHDADLMR IAGDPRRVAN
LSASEIQQLD AGRWHSAAFA GESVPTLLQM LNEARNKIGL NIELKYNQAD PTLAQAVVAL
LQQQKMTQQV VITSLEARAI EEVQRLDPSI QTGLIVTQSI GDPIKSNAQF LAINQSITNE
KFIARAHKGG KQVHVWTVNN PRQMLRMLAL GADVLITDYP QEAVEIREQW LSLSPVEQTA
LRLRYVL
|
|---|
| |