Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0086 |
Symbol | |
ID | 5373383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 105935 |
End bp | 107173 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640828275 |
Product | hypothetical protein |
Protein accession | YP_001364322 |
Protein GI | 152998641 |
COG category | [R] General function prediction only |
COG ID | [COG2819] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGATCGG ATTTACTTTC AATAATACGG GTGTTAACTT CGGCTGATAC TTATATAGTT GATTTTCAAG GAATGAAATT TATGCGTACG CTATTAATTC TGCTGGTGAT TTACAGCTTT GCATTCTTCA ATGTGTCAGC AAATGCCGAT GATACTTTTC CCGCTCAGCC ACTGATGTTA AAGGTCAGTT CGAGCCTGTT AACTGAGCCT GCTGACTTTA AGGTGACATT GCCGGCCAGT TACCAGTCCA ATACTGATAA ACGTTACGTG GTATTGGTGG ATTTACATCC TCGTAGTCAT GGCTATCTCG CTGGAATGGA AGATTGGATG AGTCATAACG GTGGCTGGCC TTGGCTGGAA ACCATTATAG TGACGGCGCC AGATGGTCAT GCAGGCTTGG GTGAGTTAAA AAGCTTAGCC ACTAAGCAGC AAGAAAATCA GCAGTTTTTA GATTTTATGG AGCAAGATCT ACTGCCCGCC ATTGATAAAC AGTATCGCAC AAATGGTTTT CGGATCCTCA ATGGCTTCAC TGGCTATGCC ACTTTTAGCC TCTACACGCT TTTGAATCGC CCAAGCCTAT TTAATGCTTA CATCGCCGCA AGTCCCGTAC TGGATGATAA CTACGCTTTT GTAATGGCAG ATGCTGCAAA GAAGCTCGCA GGTATGAAAG GGAAGCCAAG ATTCCTTTTT ATAAGCACTA GCGACAGTGA TTTCGAACAA AATCAATTAG CTGACTTTGC CAAGCTTGAA GCCATTATCA AAGCGAACGC TACGAATTTA CTCGATTATC GCATCAAGCG CTTCGATGGC ACTTACTATA TGACGCAACC TATTTTGGCG ACGGCTTATG GTATTGAAGC TATTTTTAAC GATGTACACC AAGTGCTTAA GCCTGACTCG GCAATATCAC GTCAAGGTGT AGCCGCTATT TTGGCGCATT ATAAAACCCT GTCGAACGAC AAATATGGTT TTGACGTACC CGCGACAGAT TCGCTTATCG CGTTGGCAAG TTCTTTCGAG ACGACTGATC CCACCAAAGC TATCGACATT TATCAGCAAA CCTTAAAAGC GATCCCAACA GCATTCGAGG CCAGCCATGC ATTGGCAAGC GCCTATGCGA GCCAGGGTCA GCTAGTTGAA GCGATTAAGT ATGAAAAGCA AGCGCTTGAA TTAACTGACC ATCCATTCTT CCAAGACAAA TACAGTAAAC AGTTAGCTGA GTATCAGGCG AAGCATTAA
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Protein sequence | MRSDLLSIIR VLTSADTYIV DFQGMKFMRT LLILLVIYSF AFFNVSANAD DTFPAQPLML KVSSSLLTEP ADFKVTLPAS YQSNTDKRYV VLVDLHPRSH GYLAGMEDWM SHNGGWPWLE TIIVTAPDGH AGLGELKSLA TKQQENQQFL DFMEQDLLPA IDKQYRTNGF RILNGFTGYA TFSLYTLLNR PSLFNAYIAA SPVLDDNYAF VMADAAKKLA GMKGKPRFLF ISTSDSDFEQ NQLADFAKLE AIIKANATNL LDYRIKRFDG TYYMTQPILA TAYGIEAIFN DVHQVLKPDS AISRQGVAAI LAHYKTLSND KYGFDVPATD SLIALASSFE TTDPTKAIDI YQQTLKAIPT AFEASHALAS AYASQGQLVE AIKYEKQALE LTDHPFFQDK YSKQLAEYQA KH
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