Gene Shew185_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0086 
Symbol 
ID5373383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp105935 
End bp107173 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content44% 
IMG OID640828275 
Producthypothetical protein 
Protein accessionYP_001364322 
Protein GI152998641 
COG category[R] General function prediction only 
COG ID[COG2819] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGATCGG ATTTACTTTC AATAATACGG GTGTTAACTT CGGCTGATAC TTATATAGTT 
GATTTTCAAG GAATGAAATT TATGCGTACG CTATTAATTC TGCTGGTGAT TTACAGCTTT
GCATTCTTCA ATGTGTCAGC AAATGCCGAT GATACTTTTC CCGCTCAGCC ACTGATGTTA
AAGGTCAGTT CGAGCCTGTT AACTGAGCCT GCTGACTTTA AGGTGACATT GCCGGCCAGT
TACCAGTCCA ATACTGATAA ACGTTACGTG GTATTGGTGG ATTTACATCC TCGTAGTCAT
GGCTATCTCG CTGGAATGGA AGATTGGATG AGTCATAACG GTGGCTGGCC TTGGCTGGAA
ACCATTATAG TGACGGCGCC AGATGGTCAT GCAGGCTTGG GTGAGTTAAA AAGCTTAGCC
ACTAAGCAGC AAGAAAATCA GCAGTTTTTA GATTTTATGG AGCAAGATCT ACTGCCCGCC
ATTGATAAAC AGTATCGCAC AAATGGTTTT CGGATCCTCA ATGGCTTCAC TGGCTATGCC
ACTTTTAGCC TCTACACGCT TTTGAATCGC CCAAGCCTAT TTAATGCTTA CATCGCCGCA
AGTCCCGTAC TGGATGATAA CTACGCTTTT GTAATGGCAG ATGCTGCAAA GAAGCTCGCA
GGTATGAAAG GGAAGCCAAG ATTCCTTTTT ATAAGCACTA GCGACAGTGA TTTCGAACAA
AATCAATTAG CTGACTTTGC CAAGCTTGAA GCCATTATCA AAGCGAACGC TACGAATTTA
CTCGATTATC GCATCAAGCG CTTCGATGGC ACTTACTATA TGACGCAACC TATTTTGGCG
ACGGCTTATG GTATTGAAGC TATTTTTAAC GATGTACACC AAGTGCTTAA GCCTGACTCG
GCAATATCAC GTCAAGGTGT AGCCGCTATT TTGGCGCATT ATAAAACCCT GTCGAACGAC
AAATATGGTT TTGACGTACC CGCGACAGAT TCGCTTATCG CGTTGGCAAG TTCTTTCGAG
ACGACTGATC CCACCAAAGC TATCGACATT TATCAGCAAA CCTTAAAAGC GATCCCAACA
GCATTCGAGG CCAGCCATGC ATTGGCAAGC GCCTATGCGA GCCAGGGTCA GCTAGTTGAA
GCGATTAAGT ATGAAAAGCA AGCGCTTGAA TTAACTGACC ATCCATTCTT CCAAGACAAA
TACAGTAAAC AGTTAGCTGA GTATCAGGCG AAGCATTAA
 
Protein sequence
MRSDLLSIIR VLTSADTYIV DFQGMKFMRT LLILLVIYSF AFFNVSANAD DTFPAQPLML 
KVSSSLLTEP ADFKVTLPAS YQSNTDKRYV VLVDLHPRSH GYLAGMEDWM SHNGGWPWLE
TIIVTAPDGH AGLGELKSLA TKQQENQQFL DFMEQDLLPA IDKQYRTNGF RILNGFTGYA
TFSLYTLLNR PSLFNAYIAA SPVLDDNYAF VMADAAKKLA GMKGKPRFLF ISTSDSDFEQ
NQLADFAKLE AIIKANATNL LDYRIKRFDG TYYMTQPILA TAYGIEAIFN DVHQVLKPDS
AISRQGVAAI LAHYKTLSND KYGFDVPATD SLIALASSFE TTDPTKAIDI YQQTLKAIPT
AFEASHALAS AYASQGQLVE AIKYEKQALE LTDHPFFQDK YSKQLAEYQA KH