| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0080 |
|---|
| Symbol | |
|---|
| ID | 5372052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 101688 |
|---|
| End bp | 102140 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640828269 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001364316 |
|---|
| Protein GI | 152998635 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAACA CACTGGAAAA CACAATGGAA AAGTTTCTCG CACAGCACCC TATAGTGACC
GAAATCCCCG TGGCTTGGGG CGAAATGGAT GCGTTGCAAC ACGTCAACAA CGTCGTCTAT
TTCCGTTATT TTGAGACAGC ACGTATCGAC TTTTTCAATC GCCTTTTCCC GCTAGATAGC
CTGTATAAAT CAGGTATTGG CCCGGTGATC AGCGAAAATC AGGCCCGCTA TAAACGCCCA
GTGACCTTCC CCGATACTCT ATTAGTGAGT GTCAGCATTA GCGATATTCA CAGCGATAGA
TTTACCATGC ATTATCAGGC TTTTAGTAAA CAGCAGCAGG CAGTAACCAC CTTAGGTACT
TCAGTCGCGG TGATGTTTAA CTTTAAAACC GGCAAAAAGG CCGAGTTACC GGCAGAACTG
CTGGCGATTC TCAAACAACA CGAAGTCGCC TAA
|
|---|
| Protein sequence | MPNTLENTME KFLAQHPIVT EIPVAWGEMD ALQHVNNVVY FRYFETARID FFNRLFPLDS
LYKSGIGPVI SENQARYKRP VTFPDTLLVS VSISDIHSDR FTMHYQAFSK QQQAVTTLGT
SVAVMFNFKT GKKAELPAEL LAILKQHEVA
|
|---|
| |