| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0041 |
|---|
| Symbol | |
|---|
| ID | 5371852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 49422 |
|---|
| End bp | 50627 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640828230 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | YP_001364277 |
|---|
| Protein GI | 152998596 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACA TGATCCGCTA TATCAGTTGC GTTGGATTAG GCCTGACTTT GGGCCTATCC
ATCAGCCTCT CTAGTCAAGA GAACGCTAAG TCTTATCGCA GTGATTTTGA CTATCCGTTA
CTGCAAGATG TGCTTGAAAC CGTTGAAACT TATTATGTGA AAACCGTTTC GAAAGAAGAG
TTAGTACAAG CGGCAATCAA AGGTATTTTT GAGCACTTAG ATCCCTATTC CAGCTTTTTG
AATCACCAAG AATTACTCGA TCTCAAAGAC TCCAATCGCG GCGAATATTT TGGTTTCGGC
TTCGAAGTCG CAACCCAAAA TGACCACATC AACATCATCG CCCCCTTCGC CCATTCCCCA
GCAGAACAAG CGGGAATACG CGCAGGCGAC ATTATTGTTA AGCTCAACGA CACACTGGCG
ACCGAGACTA ACCTCGCCAA TATCCTTGCC GAGATAAAAA AACATAGCCT CAGCAATCAA
AGTATTAAGC TAGTGCTCAA GCACAGCAAT GACGATACGA CCTTTGAGGT GTCACTCAAG
CCGAGCACTA TCACTATCGA ATCTGTCACC ACTCAACTGC TTGATGACAA TATTGGTTAT
GTCAGATTAA GTAGCTTCCA AGAAAACTCG ACCGAAGATA TGGTGCGCTC ACTTAGCCAA
TGGCAAAATA AACCGCTCGC CGGACTCATC TTAGATTTAC GTAATAATCC CGGTGGCCTG
CTCGACCAAG CCGTTAAAAT TGCCGACCTA TTCCTCGCCA AGGGGCGCAT AGTCTCAACC
TCTGGCCGCT TCTTCGATGC CAACTCCGAC TACTACGCCT CACCACAAAC CATGCTGACT
AACGTGCCCA TGCTAGTGTT GATCAACAAA GGCTCGGCCT CTGCATCCGA AGTGCTCGCC
GCCGCACTGC AAGAAAATGG TCGGGCTAAG CTGTTAGGTG AAACCAGTTT TGGTAAAGGC
ACAGTACAAA GCCTGATCCC CATCTTAGAA GACGGTAACG CGATAAAACT CACCATTGCT
CAGTACAATA CCCCCAGAGG TGAAAACATT CACAACATAG GAATCGTCCC AGACATAAAA
ATTGCCGCAG AAACTGGTTC CGGCGCGGGT AATTTGGCTA TAATCGACGC CCTATCCGCC
CATGCATCTC TGGCCCAAGA TCATCAAGTG ACCTCAGCCA TTGCATGGAT ACAGCATCAT
GACTAA
|
|---|
| Protein sequence | MKHMIRYISC VGLGLTLGLS ISLSSQENAK SYRSDFDYPL LQDVLETVET YYVKTVSKEE
LVQAAIKGIF EHLDPYSSFL NHQELLDLKD SNRGEYFGFG FEVATQNDHI NIIAPFAHSP
AEQAGIRAGD IIVKLNDTLA TETNLANILA EIKKHSLSNQ SIKLVLKHSN DDTTFEVSLK
PSTITIESVT TQLLDDNIGY VRLSSFQENS TEDMVRSLSQ WQNKPLAGLI LDLRNNPGGL
LDQAVKIADL FLAKGRIVST SGRFFDANSD YYASPQTMLT NVPMLVLINK GSASASEVLA
AALQENGRAK LLGETSFGKG TVQSLIPILE DGNAIKLTIA QYNTPRGENI HNIGIVPDIK
IAAETGSGAG NLAIIDALSA HASLAQDHQV TSAIAWIQHH D
|
|---|
| |