| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0014 |
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| Symbol | |
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| ID | 5373381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 18106 |
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| End bp | 19269 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640828199 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001364250 |
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| Protein GI | 152998569 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACAAA CGGAACAGAC CCTTTTCGAA CAAATGCGGA TCACTGAGCT GGAGATCGAG
TCTCGTAAGG CGCTCTTCTC TTTTACTGGG GCGGACGTAA AGGCCCTGCA ATCCTTTAAG
CCCATCATTG AAGAAAACAT AGATAAAATC GTCGATGACT TTTATGGCTT ACAAACCAGC
GTGTCAGAAA TTGCGCTGCT GATCGGAGAC TCAGACACCC TCGCCCGCTT ACGTACCGCA
CAGAGAAGAT ATGTGCTTGA TTTATTTAAT GGTGTTTATG ATCTTGAGTA CGTAAACAAT
CGCCTGCGGA TTGGGTTGGT CCATAAACGC ATTGGTGTTG AGCCTAAGCT TTACCTGTCT
GCGGTACACA CACTGAAAGA GCTTATCTAC GCCGTGATCA ACTGTTCAGT GCAAGATACA
CATCAAGGCG AATGTATCCG TGTCGCGATT GATAAACTGG TGCTGTTTGA TGTCACGTTA
GTATTCGATA CTTATATTCG CAGCTTAGTA TCCGAGATTG AGAACGCTAA GGATAAAGCC
GAAAAATATG CCCAAAGCAT GGAAAGCAAA GTCAAAGAGC GGACACAGCA GTTAGAAGAA
CTGTCGCAAA CCGATCCCTT AACAGGCCTG CTCAACGTTA GGCATTTACA AGAAACGGCA
ACGCGCATAC TCAGGGCTGC CCAAAGGCGT GCCGAACCCG TCAGCGTGAT CTACTTAGAC
GTAGATGATT TTAAGTCATT CAACGACACC CAAGGCCATA GATCAGGGGA TGAAGTACTG
CGTGCTGTAG CAAAAGCGAT TAAAGAAATC ACCCGTGCCG AGGATCATTG CTTTCGATAT
GGTGGAGATG AGTTCTGTAT CATCATGCCT AACTGCCGTG AAGAACAAGC TCGGGATAAT
TTCATCACTC GATTCAATCA AAAAATAAAA CTCAGTTTAA ACAATATTTC CTTAAGCTTT
GGCATTATTG ATACTGGACC CTATGAGTAC GAAGAAGCCA ATAGCTTAAT TCATAAAGCC
GATCAGCGAA TGTATAGCTA CAAACGTGCA TCCAAACAGC AGCAACAAAC TATGGCGGCA
GCAAATGATT TAGCACCTGA GAATAGTACC GCAGATGTCC ATTCAATCTC TCAATCTCAA
AGCGTTGATA AAGCCGTCGA GTAA
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| Protein sequence | MLQTEQTLFE QMRITELEIE SRKALFSFTG ADVKALQSFK PIIEENIDKI VDDFYGLQTS
VSEIALLIGD SDTLARLRTA QRRYVLDLFN GVYDLEYVNN RLRIGLVHKR IGVEPKLYLS
AVHTLKELIY AVINCSVQDT HQGECIRVAI DKLVLFDVTL VFDTYIRSLV SEIENAKDKA
EKYAQSMESK VKERTQQLEE LSQTDPLTGL LNVRHLQETA TRILRAAQRR AEPVSVIYLD
VDDFKSFNDT QGHRSGDEVL RAVAKAIKEI TRAEDHCFRY GGDEFCIIMP NCREEQARDN
FITRFNQKIK LSLNNISLSF GIIDTGPYEY EEANSLIHKA DQRMYSYKRA SKQQQQTMAA
ANDLAPENST ADVHSISQSQ SVDKAVE
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