Gene Shew185_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0008 
SymbolglyS 
ID5373032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp9843 
End bp11912 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content47% 
IMG OID640828193 
Productglycyl-tRNA synthetase subunit beta 
Protein accessionYP_001364244 
Protein GI152998563 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0751] Glycyl-tRNA synthetase, beta subunit 
TIGRFAM ID[TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTG AAAACTTACT CATAGAGTTA GGCACAGAAG AGTTACCACC TAAGTCACTG 
CGTAAACTGG CTGAATCCTT TTTAGCTAAC TTTACCGAAG AACTCACCAA AGCCGATTTA
GCATTTAGCT CTGCCGTTTG GTACGCAGCG CCACGTCGTC TGGCGATTAA CGTCACTGAA
CTTGCGCTTG CACAAGCCGA CAAAGTAGTT GAGAAACGTG GCCCCGCCGT GAGTTCAGCC
TTTGATGCTG AAGGTAAGCC GACTAAAGCC GCCGAAGGTT GGGCGCGTGG GAATGGTATT
ACTGTTGAAC AAGCCGAACG TTTAGTGACA GATAAAGGCG AATGGTTAGT CCATAACGCT
AAAGTTGAAG GCGTCGAAAC GAAAAGTTTG ATCGCTGCTA TGGCTCAACG TGCACTCGAT
AAATTGCCCA TTCCTAAGCC AATGCGTTGG GGTAATAATA AAACCCAATT TATCCGCCCT
GTTCATACAG CAACTATGTT GCTTGGCAGC GAGTTGATTG AAGGCGAATT GCTCGGTATT
AAATCAGCAC GCACAGTACG TGGCCATCGC TTTATGGGCC AAGCCAGCTT TGAACTAGCA
CATGCCGATC ACTACCTTGC CGACTTAAAA GAAAAAGGCA AAGTCATCGC TGATTACGAA
GTGCGTAAAA CCTTGATAAA AGCCGATGCC GAAAAAGCAG CCGCGAAAAT TGGCGGTAAA
GCCGATATCG AAGATAGCCT ACTTGAAGAA GTCGCCTCTT TGGTTGAATG GCCTGTGGTA
CTAACTGCAA GCTTTGAAGA AAAGTTCTTG AACGTACCGT CAGAAGCTTT GGTTTACACC
ATGAAAGGCG ATCAAAAGTA CTTCCCAGTC TTTGATGAAG CGGGCAAGTT ACTGCCAAAC
TTTATCTTTG TGACCAACAT AGAATCTAAA GATCCTGCGC AAATTATCTC TGGTAACGAG
AAAGTCGTTC GTCCACGTCT TGCCGACGCA GAATTCTTCT TTAATACCGA TAAAAAACAC
ACGCTGGAAT CACGTTTACC TAGCTTAGAA ACAGTATTGT TCCAACAGCA GCTGGGTACA
TTAAAAGACA AAGTAAATCG TATCTCTGCC CTAGCCGCCT TTATTGCCGA GCAAACTGGT
GCGAATGCGG TTGATGCAGC CCGTGCAGGT TTGTTATCTA AAACCGATTT GATGACCAAT
ATGGTGATGG AATTTACCGA CACTCAAGGC ACTATGGGCA TGCATTACGC CCGCCTCGAT
GGTGAAACCG AAGCCGTTGC AGTTGCGATG GAAGAGCAAT ACAAGCCTAA GTTCTCTGGC
GATACAGTGC CAAGTGCTGG CGTATCTTGC GCTGTCGCAT TAGCAGATAA GCTCGATACT
TTAGTCGGTA TCTTTGGTAT TGGCCAAGCT CCTAAAGGCG CAGCCGATCC CTTTGCCCTA
CGCCGCGCAG CAATTGGCGT GCTACGTATC ATAGTAGAAA ACAAGCTACC ACTTGATTTA
GTTGATCTTA TTGCTAAAGC ACAAGCTCTA CATGGCACTA ACTTAAGCAA CGCCAATGCA
AGCGACGAAG TGTTAGAGTT CTTAATGGCA CGCTTCCGCG CTTGGTATCA AGATAAAGGC
ATTGGTGTTG ATGTGATCTT AGCCGTGCTA GCACGTCGCC CAACACGCCC AGCTGATTTT
GATAGCCGTA TCAATGCGGT ATCACACTTT AGAAGCCTAG AAGCTTCTAG CGCACTTGCG
GCAGCGAACA AACGTGTATC CAACATTCTG GCTAAGGTTG AAGGTGCTTT ACCAACAACC
ATCAATGCGA ATCTGTTAAC TGAAGCCGCA GAGCAAGCAT TAGCGGCCAA GTTGAACGAG
CTGCAACCAC TACTGGCGCC TTTGTTTGCC AATGCCGATT ACCAACAAGC CTTAACCTTG
TTAGCTGGCC TACGTGAAAG CGTGGATCAG TTCTTCGAAG ATGTGATGGT AATGGCGGAT
GATGAAGCGT TGAAAAACAA TCGTTTAGCA TTGTTGAATA ATCTACGCGA GCAGTTCCTG
CACGTCGCGG ATATATCACT ACTGCAATAA
 
Protein sequence
MNFENLLIEL GTEELPPKSL RKLAESFLAN FTEELTKADL AFSSAVWYAA PRRLAINVTE 
LALAQADKVV EKRGPAVSSA FDAEGKPTKA AEGWARGNGI TVEQAERLVT DKGEWLVHNA
KVEGVETKSL IAAMAQRALD KLPIPKPMRW GNNKTQFIRP VHTATMLLGS ELIEGELLGI
KSARTVRGHR FMGQASFELA HADHYLADLK EKGKVIADYE VRKTLIKADA EKAAAKIGGK
ADIEDSLLEE VASLVEWPVV LTASFEEKFL NVPSEALVYT MKGDQKYFPV FDEAGKLLPN
FIFVTNIESK DPAQIISGNE KVVRPRLADA EFFFNTDKKH TLESRLPSLE TVLFQQQLGT
LKDKVNRISA LAAFIAEQTG ANAVDAARAG LLSKTDLMTN MVMEFTDTQG TMGMHYARLD
GETEAVAVAM EEQYKPKFSG DTVPSAGVSC AVALADKLDT LVGIFGIGQA PKGAADPFAL
RRAAIGVLRI IVENKLPLDL VDLIAKAQAL HGTNLSNANA SDEVLEFLMA RFRAWYQDKG
IGVDVILAVL ARRPTRPADF DSRINAVSHF RSLEASSALA AANKRVSNIL AKVEGALPTT
INANLLTEAA EQALAAKLNE LQPLLAPLFA NADYQQALTL LAGLRESVDQ FFEDVMVMAD
DEALKNNRLA LLNNLREQFL HVADISLLQ