Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_4316 |
Symbol | ligB |
ID | 5336581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 2560587 |
End bp | 2562098 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | ATP-dependent DNA ligase |
Protein accession | YP_001364043 |
Protein GI | 152968259 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.375111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.488131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTCG CCGACGTCGT CGCCACCTCC ACCGCCGTCG CCGCGACCCG CTCGCGCACG GCCAAGGTCG CGGCCATCGC CGGGCTGCTG CGGGGACTGG ACCCGGCCGA CGCCGAGCTG ACCGCCGTCG TGGCCGCCTA CCTCGGCGGC AGCCTGCGCC AGCGCCGCAC CGGGCTCGGC GGGCGCAGCC TCAGCGGCCT GCCCGCCCCG GCCGGCGAGG CGTCGCTGGA GGTCGCGGAG GTCGACCGCC GCTTCGAGGA GGTCGCGGCC CTGTCCGGCC CGGGGTCGGC CGGGCGCCGC GCCGCCGCGG TCGCCGACCT CTTCGCCCGG GCCACCGGCG AGGAGCAGCG CTGGCTGCGC GGGGTCGTCG CGGGCGAGCT GCGCCAGGGC GCGCTGGACG CGCTGGTCCA GGACGCGGCC GCGGCCGTCG CCGGGGTCCC CGGCCCCGAC GTGCGGCGGG CGGCGATGCT CGCCGGGTCG ACGGTGCAGG CCGTGGTCGC CGCGCTGCGC GGGGGCGCCG CGGAGCTCGC GGGCTTCGGG CTGCACGTCG GCCGCCCGCT GCTGCCGATG CTCGCCGCCA GCACCACCTC CGTCGCGGAG GCCGTCGCCG GGTTCGCGGG CCCGGTGGCC GTGGACACCA AGCTCGACGG GATCCGCATC CAGGTCCACC GCGGGCCGGA GGGCGTCCGG ATCGCGACCC GGACCCTGGA GGACATCACC GCTCGGCTGC CCGAGGTCGT CGAGGTGGTG CGGGAACTGC CCGCCCGCGC GTTCGTGCTG GACGGCGAGG CCCTCGTCCT CGACGGGTCC GGACGCCCGA AGGCGTTCCA GGACACCGCT TCGCGCACGG CGCAGGCGAG CGGTGACGCG GTGGTGCCGT ACTTCTTCGA CGTCCTGCAC CTCGACGGCG CGGACCTGCT CGACGTCGCG CTGCGCGAGC GCCTCGCCGC CCTCGACGGG TTCGTCCCGC CCCGGTGGCG GACCCCTCGC CTGGTCACCG CGGACCCCGC GGCCGCGGCG GAGTTCGCCG CGCAGGCGCT GGCGGGCGGC CACGAGGGCG TCGTCGTCAA GGACCTCGAC TCCCCCTACG CGGCCGGCCG GCGCGGCGGG GCGTGGGTGA AGGTGAAACC CGTGCACACC CTCGACCTGG TCGTCCTGGC CGTGGAACGG GGTTCGGGAC GGCGGGCGGG CTGGCTGTCG AACGTCCACC TGGGCGCCCG CGACCCCGCG ACGGGGGGTT TCGTCATGCT GGGCAAGACG TTCAAGGGCA TGACCGACGA GACGCTGGCC TGGCAGACCG CGCGGTTCCG CGAGCTGCAG ACCGGCGAGG ACGGGTACGT GGTGACGGTG CGCCCGGAGC AGGTCGTGGA GGTCGCCTTC GACGGCCTGC AGCGCTCGAC CCGCTACCCG GGCGGGGTGG CGCTGCGCTT CGCCCGCGTC GTGCGCTACC GCGAGGACAA GACCGCGGCC GAGGCCGACA CCCTGGAGAC GGTGCTGGCC CTGGCCCGCT GA
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Protein sequence | MLLADVVATS TAVAATRSRT AKVAAIAGLL RGLDPADAEL TAVVAAYLGG SLRQRRTGLG GRSLSGLPAP AGEASLEVAE VDRRFEEVAA LSGPGSAGRR AAAVADLFAR ATGEEQRWLR GVVAGELRQG ALDALVQDAA AAVAGVPGPD VRRAAMLAGS TVQAVVAALR GGAAELAGFG LHVGRPLLPM LAASTTSVAE AVAGFAGPVA VDTKLDGIRI QVHRGPEGVR IATRTLEDIT ARLPEVVEVV RELPARAFVL DGEALVLDGS GRPKAFQDTA SRTAQASGDA VVPYFFDVLH LDGADLLDVA LRERLAALDG FVPPRWRTPR LVTADPAAAA EFAAQALAGG HEGVVVKDLD SPYAAGRRGG AWVKVKPVHT LDLVVLAVER GSGRRAGWLS NVHLGARDPA TGGFVMLGKT FKGMTDETLA WQTARFRELQ TGEDGYVVTV RPEQVVEVAF DGLQRSTRYP GGVALRFARV VRYREDKTAA EADTLETVLA LAR
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