Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3890 |
Symbol | |
ID | 5335365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 3007502 |
End bp | 3009403 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_001363617 |
Protein GI | 152967833 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0371548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTGGC ACCCTGTCCC GGTGCCCGCG AACGCGCCCG ACACCCCGGA GGACAAGGTC GTCGCGGTGG TCGTCGCCTA CGACCGCCGG GACCTCCTGC TCGCCGGTCT CGACGCGCTC GCCGCCCAGA CCCGCCGCCC CGACCTCGTC GTCGTCGTCG ACAACGCCTC CTCCGACGGC TCCCCGCAGG CCGTGCGGCG GTGGGCGGAG GGGCACGACC TGCCCCTCGA CCTCGTCGTC CTGCCCCGCA ACACCGGCGG CGCGGGCGGG TTCACCGCCG GCCTGGCCCG CGCGGTGCAC CGCCACGGCG CCGGCGCGGT CTGGCTCATG GACGACGACA CCGTGCCCCG CCCCGACGCG CTCGCGGCCT CGCTGACGGC GATGCGCCGC ACCGGTTCCG CCCTCGTCGC CAGCCGGGTC GTGTGGACCG ACGGGCGCGA CCACCCGATG AACACCCCCC GCGAGCGCCC CGGGGTCACC GCCGCCGAGC GCGCCGCGGC CGCGGCGGCG GGCTGCCTGC CCGTGCGCTC GGCGAGCTTC GTGGCGCTGC TGCTGGACGC CCGCGCCGTG CGCGAGGACG GGCTGCCCGA GGCCGCGTTC TTCCTCTGGA ACGACGACTT CGAGTACACG ACCCGCCTGC TGCGCCACCG CCGCGGGGTC TCCTGCCCGG ACAGCGTCGT CGAGCACCGC ACGAGGGTCT TCGGCGGCGC CGACGCCGAC CCGGGGGAGC GCTTCGCGCT GGAGGTCCGC AACAAGCTGT GGACCTTCAC CCGCTCCCGC CCCCTCGGCG CGCGCGACAC CGTCCTCTAC GGCGGGGCGA CGCTGCGCCG CTGGGTCCGG ACGGTGGCCC GCTCCCGCCG CCGCGACGTG CTGGTGCGGG GGCTCGCGAC CGGTCTGCGC CAGGGCGCGG AGCGGCCCGA GCCGACCGCC GCCGTCCTGC GCGACCTGCC CGAGGTCGCC GCCGACGTCC GCGCGGTGGA GTCCGCGGCC GGGCGCGACC TCGGCGCCGC CGCGCGGGTG GAGCCCACCG CCCCCCGCGA GGGGCTGCCG GCGTTCTCGG TGCTGCTGCC GGTGTGGGCC CGCGACGACG CCGCGCAGCT GCGGCGCGCC GTCGCCAGCG TCACCACCGA GCAGGAGCTG CGCCCCGACG AGGTCGTCGT CGTCCGCGAC GGTCCCGTGC CGCCGGCCCT GCAGGAGGTC CTCGACGAGC TCTCGCGCGG GCCGGGGACC CGGGTGCACC CGCTGCCGCG CAACGTGGGG CTGGCCCGCG CCCTGGAGGC CGGGCTCGCC GTCTGCACCC ACGACGTGGT GGCCCGGATG GACGCCGACG ACGTCAGCCT GCCCACCCGC TTCGCGCGCC AGCTGCCCGT CATCGCCGCC GGCGCCGACC TCGTCGGGGC CGGGCTGCTG GAGATCGGCG CCGACGAGGA CGACGTCGTG GGCCGGCGCG TCCCGCCCAC CGGGGCCGCC GAGATCGCCC GCTACGCCCG CTTCCACGAC CCCTTCAACC ACCCCACGGT CGTGTACCGC CGCTCCGCGG TCGCCGCGGC GGGCGGGTAC CGCGACCTGG AGCTGATGGA GGACTACTGG CTCTTCGCCC GGATGATCGC CGCCGGCGCC CGCGTGGAGA ACCTGCCCGA GCCGCTGGTG AAGTACCGCG TCGGCGCGAG CCCGGACGCG GGGTCCTACG CCCGCCGCGG GGGCCTGCGG CTGTTCCGCT CCGAGCTCAC CCTCCAGCGC CACCTGCGCC GCGAGGGGTT CACCACCCCC GTCCAGGCCG TGCGCAACGT CGTCGTCCGC GGCGGGTACC GCTTCGTGCC GACCCGGGTC CGCACCGCCG CCTACCGCGC CCTCATCGCC ACGACGAACG AGACGACGCA CGAGCAAGGA GGTGGACGGT GA
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Protein sequence | MTWHPVPVPA NAPDTPEDKV VAVVVAYDRR DLLLAGLDAL AAQTRRPDLV VVVDNASSDG SPQAVRRWAE GHDLPLDLVV LPRNTGGAGG FTAGLARAVH RHGAGAVWLM DDDTVPRPDA LAASLTAMRR TGSALVASRV VWTDGRDHPM NTPRERPGVT AAERAAAAAA GCLPVRSASF VALLLDARAV REDGLPEAAF FLWNDDFEYT TRLLRHRRGV SCPDSVVEHR TRVFGGADAD PGERFALEVR NKLWTFTRSR PLGARDTVLY GGATLRRWVR TVARSRRRDV LVRGLATGLR QGAERPEPTA AVLRDLPEVA ADVRAVESAA GRDLGAAARV EPTAPREGLP AFSVLLPVWA RDDAAQLRRA VASVTTEQEL RPDEVVVVRD GPVPPALQEV LDELSRGPGT RVHPLPRNVG LARALEAGLA VCTHDVVARM DADDVSLPTR FARQLPVIAA GADLVGAGLL EIGADEDDVV GRRVPPTGAA EIARYARFHD PFNHPTVVYR RSAVAAAGGY RDLELMEDYW LFARMIAAGA RVENLPEPLV KYRVGASPDA GSYARRGGLR LFRSELTLQR HLRREGFTTP VQAVRNVVVR GGYRFVPTRV RTAAYRALIA TTNETTHEQG GGR
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