Gene Krad_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_3880 
Symbol 
ID5334430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp3019000 
End bp3020127 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content76% 
IMG OID 
Productputative conserved membrane protein 
Protein accessionYP_001363607 
Protein GI152967823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00561968 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGTGACC CCAGGACCCT GATCCCCGTC CTGCTGGGGA TCGTGCTCGC GGTCGTCGTC 
GTCCGCAGCG GTGTCGGGCA GGCGTCCTGG GAGGTCGGGT ACGACCTCTC CGTCTACCGC
GACGGCGCCC GGGACCTGCT GGCCGGCCGT GACCTCTACG GGCGCGAGAC CTACCGCGGG
CACTGGTTCG TGTACCCGCC GTTCGCGGCG ATCCTCTTCG TGCCCCTGCT CCTGCTGCCC
GCGGCGGTGG ACCTCGTCCT GTGGGACGCG GTGCTGGTCG CGGTGGCGAC GTGGGGGTGC
TGGCGGGTCC TGCGCTCCGT CGCCGGCCCC GGGTGGTGGC TGGGGACGGG GATCGCGTTC
GTCCTGCTCA GCGACCCGTT CCGCGAGGCG CTGGTGCTGG GGCAGATCAG CCCCCTCGTC
GTGCTGGGGC TCGTGCTCGG CTGCCTCTAC GGCGGGCGCG GGGGGGCCCT GCTCGCCGCG
CTGTCGGGGG CGGTGAAGGT GACCCCGGCC CTGGTGATCG CCTCGCTGCT GAACCGGCGG
GCCCGGGGGT GGTTCGCGCT GCCCGTGGTC GTCGTGGGGG CGGTGGTGAC GCTGCTCGGG
GCCCTGGTGG CCCCGCGCTC GGCGGTGTCC TACTTCGGGG GCCTGCTCTG GGACCCCGAC
CGCGTCGCGG AGCCGCGGAC GACGACGAAC AACTCGCTGG CGGGGGCGTT CGCGCACGCG
GGGACGTCGT CCTCGCTGGC CTCGGCGCTG GGGGTGGTGT GCGCGGTCCC GCTGCTGGTC
CTCGTCGTCG TCGTCGCCCG GCGCTGCGAC TGGCTGGACC GCTCCGCGCG GCTGCGCTTC
GGGCTGCTCG TCTCCGTCGT GACCTGCCTG GTGTCGCCGG TGACGTGGTC GCACCACGCG
CTGGCCGCCC CGATCGCGGT GGTGGTGCTG CTGGCCGGGC GGCGCCACGG CCCCCTGCTG
GTGCTGGCGG GTCTCCCGTG GCTGCTGCCG GTGCTGCACT GGGGGCCGGT GCTCGCCCAG
ACCCGGCCGC TGTCGCTGCT GGTGCTCGTC GTCCTGCTCA GCGCGCGCCC GTCGCGCACC
GCGCGGGCGC CGCGCTCCGA GCTGGACGGG GCCGCCCGGG AGGTCTGA
 
Protein sequence
MRDPRTLIPV LLGIVLAVVV VRSGVGQASW EVGYDLSVYR DGARDLLAGR DLYGRETYRG 
HWFVYPPFAA ILFVPLLLLP AAVDLVLWDA VLVAVATWGC WRVLRSVAGP GWWLGTGIAF
VLLSDPFREA LVLGQISPLV VLGLVLGCLY GGRGGALLAA LSGAVKVTPA LVIASLLNRR
ARGWFALPVV VVGAVVTLLG ALVAPRSAVS YFGGLLWDPD RVAEPRTTTN NSLAGAFAHA
GTSSSLASAL GVVCAVPLLV LVVVVARRCD WLDRSARLRF GLLVSVVTCL VSPVTWSHHA
LAAPIAVVVL LAGRRHGPLL VLAGLPWLLP VLHWGPVLAQ TRPLSLLVLV VLLSARPSRT
ARAPRSELDG AAREV