Gene Krad_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_3793 
Symbol 
ID5333664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp3129332 
End bp3130312 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content77% 
IMG OID 
ProductRNA polymerase, sigma 28 subunit, FliA/WhiG family 
Protein accessionYP_001363520 
Protein GI152967736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.125919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGGA CGCCTCCGCG CCCGCGGGCG CGCGACGTCC CGGTGGCGCG CACCCCGGAC 
CCCGGCGACC CTGGGGTCAT CGACCCGCAC CGCAGAGCCG ACGAGGCCCG GTCGCTGCCG
CCGCCGGCGG AGTCCCCCGG GCCGGACCAC CTCCTCGCCG ACGACGGCCC CGAGACCCCC
GCACCCGCCG CGACCGCCGA CGCGGAGCCG GCCGGGGCAC CTCTCGTGCT GCCCTCCTCC
CGCGACGTGG AGGACGCTCC CCTGCTCTCG CGGATGGCGT CGCTGGACCC CGAGGACCCC
GAGCGGGCCC GGTTGCGCGA GGAGCTGACC CGGCGCCACC TGCCGCTGGC CGACCACCTG
GCCGCCCGCT TCCTGGGGCG GGGGGAACCC CAGGACGACC TGGTGCAGGT CGCGACGATC
GGTCTGCTGA AGGCCCTGGA CCGCTTCGAC CCCTCTCGGG GCGTCCCCTT CGGCGCCTAC
GCGGTCCCGA CGATGCTCGG TGAGATCAAG CGGCACTTCC GCGACCGCGG GTGGGCCATG
CGCGTGCCCC GGCGCATCCA GGAGGCGGGA CGGGCCCTGG GGGACGCGAG GGAGGCGCTC
ACCCACGAGC TGGGCCGGGC CCCGACGGTG GCCGAGCTGG CCGAGCGCAC CGGGTACGAC
CCCGAGGACG TGGTCGACGT CCTGGAGTCG GCCAACGCCT ACTCCACGCT GCCGCTGGAC
ACCGGGTCGC CGACCTCGCT GGTGGCCTCC CTGGGGGCGG ACGACGACGC GCTGCAGAAC
GTGGAGAACC GCGAGGCCCT GCGGCCGCTG CTGGCCGGGC TGCCGGCGCG GGAGCGGCGG
ATCCTGGCCC TGCGCTTCGT CCGGGGCATG TCCCAGTCCC AGATCGCCGC CGAGGTGGGC
ATCTCGCAGA TGCACGTGTC CCGCCTGCTC ACCCGCACCC TGGCCCAGCT GCGGGAGGGT
CTGGGCGACG AGGCGGGCTG A
 
Protein sequence
MNRTPPRPRA RDVPVARTPD PGDPGVIDPH RRADEARSLP PPAESPGPDH LLADDGPETP 
APAATADAEP AGAPLVLPSS RDVEDAPLLS RMASLDPEDP ERARLREELT RRHLPLADHL
AARFLGRGEP QDDLVQVATI GLLKALDRFD PSRGVPFGAY AVPTMLGEIK RHFRDRGWAM
RVPRRIQEAG RALGDAREAL THELGRAPTV AELAERTGYD PEDVVDVLES ANAYSTLPLD
TGSPTSLVAS LGADDDALQN VENREALRPL LAGLPARERR ILALRFVRGM SQSQIAAEVG
ISQMHVSRLL TRTLAQLREG LGDEAG