Gene Krad_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_3458 
Symbol 
ID5335001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp3509058 
End bp3512792 
Gene Length3735 bp 
Protein Length1244 aa 
Translation table11 
GC content78% 
IMG OID 
Productribonuclease, Rne/Rng family 
Protein accessionYP_001363185 
Protein GI152967401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGGTG CGGCGCGGAC GGTCTCAGAC CGTGCGCGGC ACCCCGCGGC GCACCGGTGC 
GCGGTCACCG CACCGCGCGG AGGCGGTGCG GGCGAGGTCG ACGTGGCGGC GCCGGGTGAG
CGGGAGCGGG GTAGGGCTGT GCACTGCGTT CCTCCATCGC CCCTGGCGGG AGCACCTGCC
GCTGCGCGGT GGTTGCTGTG GCGTCGTCGA GCCAGGTCTC TCGGCCACTC TGGATGGTGT
TGCCGGGAGC GTAGCGGACG CCCCGCTCCG GCCGCGACCT CCTCGGGGCG TCGGCGTCCC
GGTGCGCCGG GACGGGCGGA GCGGGCTGTG CCACACTGTC AGTGGTCGAG CGTTCCCCAC
ACCGGGCGCC CGGCCCGCCG TCGAGACCGC CGCCCTGCGC GCGGGTCCCG GGCAGCGCCG
CGGTCCAGTG GAAGGACCTC GCAGGCGCCC CGGCCCACGC GCTGGACGTC GACCGCCGGC
GGCACGAGCG GAGGCCCGCG ACGAGCGCGG GCACGCTGGT GCACCGAGGA CTTCCGTCGG
GTGCGGGACG ACCCACCCGG CGATTCCGAC CAGGACGCTC GCGCGACCGT GGGTTCACCG
GTGGAGCGGT CGTCGCGGGC GAGCGGAGCA CCCGTGACGA CCACACCCGA AGAGAACGCC
GCCCCCACCG CCGAGGGCGC AGCCACCGCG CGCCCCCGTC GACGCCGCGC CGCCAGCCGC
CCCGCCGGTC CACCGGCCCG CGTCCAGCCG GAGAGCGCGC CGGCCGAGCC CGCCGCGCCG
GCGGCGTCGG AGTCGACGCC CGCCGTGGAG CCCGCCGCCG AGCCGGTGGT CGAGGCCCCC
GCCGTCGAGG CCCCCGCCGT CGAGGCCCCC GCGGCTGAGA CCCCTGCGGC CGAGGTCCCC
GTCGTCGAGA CCCCCGCGGT CGAGGCTCCC GTCGAGGCGG TCGCCGCGGC CGAACCCGCC
CCGCGTCGCC GGACCCGCCG GGCGACCCGC AAGGTCGCCG CCCCGGCGGA GACCGTGGTC
GAGCCCGCGG CCGTGGCCGC CCCGGCCGAG GTCCCGTCGG AGCCCGCGCC CGCACCCGAG
ACCGCCGCCG AGCCGGTCGC CGAGGCCCCC GAGGCCCCGG CCGCGCCCGC CCGTCGTCGC
CGGAGCCGCA AGGCGGTCGC GCCCGCCCCC CTCGCCGAGG CCCCCGCCGT CGAGGCCCCC
GCCGTCCCGG AGGTCGAGGC GCCCCGGACC GAGGTCGTCG CCGTCGCCGA GGACGCCCCG
GTGGAGGAGA CCCCCGTCGA GACCCCTGTC GCGGCCGCCG TCGAGGCGCC GGCCGCGCCG
GCTCCCGTCG CGGCGACCGC CCCCGCCGCG CCCGCCGAGC AGCCCGACCT CATGGACGAC
CCCGTCCTCC TGCGCGCCGC CGGGTTCGCC CAGGGCCGCC GCGCGCCCTC CGAGGGCGAG
CGCGCCGCCG ACGCGGCCGC CCGGGCGACC GCGCTGTTCT TCCAGGCCCC CGTCGACGAG
GCGCCCACCC GCCGCAGCCG CCGGGCGTCC GCCCCCGCGG GCCCGCCGCC CGTCAGCGAC
CGGGAGGCCC CCGCCCTCGA CGAGGACGAC GACCTCCTCC TCGACGACCT CCTCCCCGGA
GCGGACGACG AGGCCGGTGA GGACGCCCCC GAGCTCGACG GCGACGCGCC CGGCTCGGCC
GAGGACGGCG ACGAGGAGCA GGACGAGGAC GGCGGCGCCC CGCGCCGACG CCGTCGCCGC
GGTGGCCGCG GCCGCCGCAG CCGCACCCGC GAGGACGGCG AGGCCGACAC CGACGAGGAG
CCCACCGAGG CCGGCGAGGT CGGCGAGGCC CGTGACGGGT CCGACGACGA GGAGCCCGAG
GCCGGCGCGT CCGCCTCCGA CGACGAGGAC GAGGACGGGG AGGAGCCCAG CGGCTCCTCG
CGCCGCCGTC GCCGCCGTCG TCGGCGCAGC GGGGCCGGGG AGACCGAGGA CGGCTCGCCC
GACGACCCGC CCAACACCGT CACCCGGGTC CGCGAGCCGC GTCGCCCGCG CACCGGCGCG
GCGACGACGG GCGGCACCGG CGAGGACGAG ATCACCGCGC TCAAGGGCTC CACGCGCCTG
GAGGCCAAGA AGCAGCGCCG CCGCGAGGGC CGCGAGCAGG GGCGCAAGCG GGCCATCCTC
ACCGAGGCCG AGTTCCTCGC CCGCCGCGAG GCCGTCGAGC GCGTCATGGT CGTGCGCCAG
CAGGCCGACA AGACGCAGAT CGGTGTCCTC GAGGACGGGA TCCTCGTCGA GCACTACGGG
GCGAAGCTCG CCCAGACGAC GATGGTCGGC AACGTCTACC TCGGCCGGGT GCAGAACGTG
CTGCCCAGCA TGGAGGCCGC CTTCATCGAC GTCGGCAAGG GCCGCAACGC CGTCCTGTAC
GCCGGCGAGG TGAACTGGGA CGCCGCGGGC CTGGAGGGCC AGCCCCGCCG CATCGAGGCC
GCGCTGAAGT CCGGCGACCC CGTCCTCGTC CAGGTCACCA AGGACCCCGT CGGCCACAAG
GGCGCGCGGC TCACCAGCCA GGTCTCCCTG CCCGGCCGCT ACCTGGTCTA CGTCCCGCGC
GGGTCGATGA CCGGCATCTC CCGCAAGCTG CCCGACACCG AGCGCGCGCG GCTGAAGAAG
GTCCTCAAGC AGGTCGTGCC CGAGGGGGCG GGCGTCATCG TGCGCACCGC CGCCGAGGGG
GTCGCCGAGG AGGAGCTGGC CGCGGACGTG CAGCGCCTGC AGGCGACGTG GGAGGCCATC
CAGGCCAAGG CGTCGAGCAA GAACGCGCCC GTCCTGCTGC ACGGGGAGCC GGACCTGACC
GTCCGGGTCG TGCGCGACGT CTTCAACGAG GACTTCACCA AGCTCGTCAT CTCCGGCGAC
GAGGCCTGGG AGACCGTGCG CGGTTACGTC GACGACGTCG CCCCCGACCT CGCCGAGCGC
CTCGAGCGCT GGGACGGCGG GGCGGGCGGC GCCGAGGACG TCTTCGCCCA CCACCGCATC
GACGAGCAGC TGCAGAAGGC CCTCGGCCGC AAGGTCTGGC TGCCCTCGGG CGGTTCGCTG
GTCATCGACC CGACCGAGGC CATGCACGTG GTCGACGTCA ACACCGGCAA GTTCACCGGT
GCCGGCGGCA CGCTGGAGGA GACCGTCACC CGCAACAACC TCGAGGCGGC GGAGGAGATC
GTCCGCCAGC TGAGGTTGCG CGACATCGGC GGGATCATCG TCATCGACTT CATCGACATG
GTGCTGGAGT CCAACCGGGA CCTGGTGCTG CGCCGCCTCG TCGAGTGCCT GGGCCGCGAC
CGCACCAAGC ACCAGGTGGC CGAGGTGACC TCCCTGGGCC TGGTGCAGAT GACCCGCAAG
CGCACCGGCC AGGGCCTGGC GGCCGTGCTC GACGAGCTGG ACGCGGCCGC CGACGCCAAC
CCCGCCCCGC AGCCCGCGCC CGGCGGGTCC TCCAGCGGCC CCGCCGCGTC CGGCGGCTCC
ACCGGCGGGA ACGGGGCGGG CGGGAAGTCC CGCGCGCGCC GCGGCCGCGG GCGGGACAAG
GGCGGCGAGG GCGAGGCGGA CACCGCCCGG TCCTCCGACG CCCAGCCGGG CGAGGGGGTC
GCCGAGGCCG GCGGGGAGCC CCCGCGCGAG CCGGGGAAGG ACTCCGCCGT CCTGGCCGCC
ATCGCGGCGG TGGCGGCGGC GGCGCGCAGC AAGGAGCGCG AGGAGTCCTC GAGCCCCGCG
CCGGTGCAGG ACTGA
 
Protein sequence
MRGAARTVSD RARHPAAHRC AVTAPRGGGA GEVDVAAPGE RERGRAVHCV PPSPLAGAPA 
AARWLLWRRR ARSLGHSGWC CRERSGRPAP AATSSGRRRP GAPGRAERAV PHCQWSSVPH
TGRPARRRDR RPARGSRAAP RSSGRTSQAP RPTRWTSTAG GTSGGPRRAR ARWCTEDFRR
VRDDPPGDSD QDARATVGSP VERSSRASGA PVTTTPEENA APTAEGAATA RPRRRRAASR
PAGPPARVQP ESAPAEPAAP AASESTPAVE PAAEPVVEAP AVEAPAVEAP AAETPAAEVP
VVETPAVEAP VEAVAAAEPA PRRRTRRATR KVAAPAETVV EPAAVAAPAE VPSEPAPAPE
TAAEPVAEAP EAPAAPARRR RSRKAVAPAP LAEAPAVEAP AVPEVEAPRT EVVAVAEDAP
VEETPVETPV AAAVEAPAAP APVAATAPAA PAEQPDLMDD PVLLRAAGFA QGRRAPSEGE
RAADAAARAT ALFFQAPVDE APTRRSRRAS APAGPPPVSD REAPALDEDD DLLLDDLLPG
ADDEAGEDAP ELDGDAPGSA EDGDEEQDED GGAPRRRRRR GGRGRRSRTR EDGEADTDEE
PTEAGEVGEA RDGSDDEEPE AGASASDDED EDGEEPSGSS RRRRRRRRRS GAGETEDGSP
DDPPNTVTRV REPRRPRTGA ATTGGTGEDE ITALKGSTRL EAKKQRRREG REQGRKRAIL
TEAEFLARRE AVERVMVVRQ QADKTQIGVL EDGILVEHYG AKLAQTTMVG NVYLGRVQNV
LPSMEAAFID VGKGRNAVLY AGEVNWDAAG LEGQPRRIEA ALKSGDPVLV QVTKDPVGHK
GARLTSQVSL PGRYLVYVPR GSMTGISRKL PDTERARLKK VLKQVVPEGA GVIVRTAAEG
VAEEELAADV QRLQATWEAI QAKASSKNAP VLLHGEPDLT VRVVRDVFNE DFTKLVISGD
EAWETVRGYV DDVAPDLAER LERWDGGAGG AEDVFAHHRI DEQLQKALGR KVWLPSGGSL
VIDPTEAMHV VDVNTGKFTG AGGTLEETVT RNNLEAAEEI VRQLRLRDIG GIIVIDFIDM
VLESNRDLVL RRLVECLGRD RTKHQVAEVT SLGLVQMTRK RTGQGLAAVL DELDAAADAN
PAPQPAPGGS SSGPAASGGS TGGNGAGGKS RARRGRGRDK GGEGEADTAR SSDAQPGEGV
AEAGGEPPRE PGKDSAVLAA IAAVAAAARS KEREESSSPA PVQD