Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3458 |
Symbol | |
ID | 5335001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 3509058 |
End bp | 3512792 |
Gene Length | 3735 bp |
Protein Length | 1244 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | ribonuclease, Rne/Rng family |
Protein accession | YP_001363185 |
Protein GI | 152967401 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGGGTG CGGCGCGGAC GGTCTCAGAC CGTGCGCGGC ACCCCGCGGC GCACCGGTGC GCGGTCACCG CACCGCGCGG AGGCGGTGCG GGCGAGGTCG ACGTGGCGGC GCCGGGTGAG CGGGAGCGGG GTAGGGCTGT GCACTGCGTT CCTCCATCGC CCCTGGCGGG AGCACCTGCC GCTGCGCGGT GGTTGCTGTG GCGTCGTCGA GCCAGGTCTC TCGGCCACTC TGGATGGTGT TGCCGGGAGC GTAGCGGACG CCCCGCTCCG GCCGCGACCT CCTCGGGGCG TCGGCGTCCC GGTGCGCCGG GACGGGCGGA GCGGGCTGTG CCACACTGTC AGTGGTCGAG CGTTCCCCAC ACCGGGCGCC CGGCCCGCCG TCGAGACCGC CGCCCTGCGC GCGGGTCCCG GGCAGCGCCG CGGTCCAGTG GAAGGACCTC GCAGGCGCCC CGGCCCACGC GCTGGACGTC GACCGCCGGC GGCACGAGCG GAGGCCCGCG ACGAGCGCGG GCACGCTGGT GCACCGAGGA CTTCCGTCGG GTGCGGGACG ACCCACCCGG CGATTCCGAC CAGGACGCTC GCGCGACCGT GGGTTCACCG GTGGAGCGGT CGTCGCGGGC GAGCGGAGCA CCCGTGACGA CCACACCCGA AGAGAACGCC GCCCCCACCG CCGAGGGCGC AGCCACCGCG CGCCCCCGTC GACGCCGCGC CGCCAGCCGC CCCGCCGGTC CACCGGCCCG CGTCCAGCCG GAGAGCGCGC CGGCCGAGCC CGCCGCGCCG GCGGCGTCGG AGTCGACGCC CGCCGTGGAG CCCGCCGCCG AGCCGGTGGT CGAGGCCCCC GCCGTCGAGG CCCCCGCCGT CGAGGCCCCC GCGGCTGAGA CCCCTGCGGC CGAGGTCCCC GTCGTCGAGA CCCCCGCGGT CGAGGCTCCC GTCGAGGCGG TCGCCGCGGC CGAACCCGCC CCGCGTCGCC GGACCCGCCG GGCGACCCGC AAGGTCGCCG CCCCGGCGGA GACCGTGGTC GAGCCCGCGG CCGTGGCCGC CCCGGCCGAG GTCCCGTCGG AGCCCGCGCC CGCACCCGAG ACCGCCGCCG AGCCGGTCGC CGAGGCCCCC GAGGCCCCGG CCGCGCCCGC CCGTCGTCGC CGGAGCCGCA AGGCGGTCGC GCCCGCCCCC CTCGCCGAGG CCCCCGCCGT CGAGGCCCCC GCCGTCCCGG AGGTCGAGGC GCCCCGGACC GAGGTCGTCG CCGTCGCCGA GGACGCCCCG GTGGAGGAGA CCCCCGTCGA GACCCCTGTC GCGGCCGCCG TCGAGGCGCC GGCCGCGCCG GCTCCCGTCG CGGCGACCGC CCCCGCCGCG CCCGCCGAGC AGCCCGACCT CATGGACGAC CCCGTCCTCC TGCGCGCCGC CGGGTTCGCC CAGGGCCGCC GCGCGCCCTC CGAGGGCGAG CGCGCCGCCG ACGCGGCCGC CCGGGCGACC GCGCTGTTCT TCCAGGCCCC CGTCGACGAG GCGCCCACCC GCCGCAGCCG CCGGGCGTCC GCCCCCGCGG GCCCGCCGCC CGTCAGCGAC CGGGAGGCCC CCGCCCTCGA CGAGGACGAC GACCTCCTCC TCGACGACCT CCTCCCCGGA GCGGACGACG AGGCCGGTGA GGACGCCCCC GAGCTCGACG GCGACGCGCC CGGCTCGGCC GAGGACGGCG ACGAGGAGCA GGACGAGGAC GGCGGCGCCC CGCGCCGACG CCGTCGCCGC GGTGGCCGCG GCCGCCGCAG CCGCACCCGC GAGGACGGCG AGGCCGACAC CGACGAGGAG CCCACCGAGG CCGGCGAGGT CGGCGAGGCC CGTGACGGGT CCGACGACGA GGAGCCCGAG GCCGGCGCGT CCGCCTCCGA CGACGAGGAC GAGGACGGGG AGGAGCCCAG CGGCTCCTCG CGCCGCCGTC GCCGCCGTCG TCGGCGCAGC GGGGCCGGGG AGACCGAGGA CGGCTCGCCC GACGACCCGC CCAACACCGT CACCCGGGTC CGCGAGCCGC GTCGCCCGCG CACCGGCGCG GCGACGACGG GCGGCACCGG CGAGGACGAG ATCACCGCGC TCAAGGGCTC CACGCGCCTG GAGGCCAAGA AGCAGCGCCG CCGCGAGGGC CGCGAGCAGG GGCGCAAGCG GGCCATCCTC ACCGAGGCCG AGTTCCTCGC CCGCCGCGAG GCCGTCGAGC GCGTCATGGT CGTGCGCCAG CAGGCCGACA AGACGCAGAT CGGTGTCCTC GAGGACGGGA TCCTCGTCGA GCACTACGGG GCGAAGCTCG CCCAGACGAC GATGGTCGGC AACGTCTACC TCGGCCGGGT GCAGAACGTG CTGCCCAGCA TGGAGGCCGC CTTCATCGAC GTCGGCAAGG GCCGCAACGC CGTCCTGTAC GCCGGCGAGG TGAACTGGGA CGCCGCGGGC CTGGAGGGCC AGCCCCGCCG CATCGAGGCC GCGCTGAAGT CCGGCGACCC CGTCCTCGTC CAGGTCACCA AGGACCCCGT CGGCCACAAG GGCGCGCGGC TCACCAGCCA GGTCTCCCTG CCCGGCCGCT ACCTGGTCTA CGTCCCGCGC GGGTCGATGA CCGGCATCTC CCGCAAGCTG CCCGACACCG AGCGCGCGCG GCTGAAGAAG GTCCTCAAGC AGGTCGTGCC CGAGGGGGCG GGCGTCATCG TGCGCACCGC CGCCGAGGGG GTCGCCGAGG AGGAGCTGGC CGCGGACGTG CAGCGCCTGC AGGCGACGTG GGAGGCCATC CAGGCCAAGG CGTCGAGCAA GAACGCGCCC GTCCTGCTGC ACGGGGAGCC GGACCTGACC GTCCGGGTCG TGCGCGACGT CTTCAACGAG GACTTCACCA AGCTCGTCAT CTCCGGCGAC GAGGCCTGGG AGACCGTGCG CGGTTACGTC GACGACGTCG CCCCCGACCT CGCCGAGCGC CTCGAGCGCT GGGACGGCGG GGCGGGCGGC GCCGAGGACG TCTTCGCCCA CCACCGCATC GACGAGCAGC TGCAGAAGGC CCTCGGCCGC AAGGTCTGGC TGCCCTCGGG CGGTTCGCTG GTCATCGACC CGACCGAGGC CATGCACGTG GTCGACGTCA ACACCGGCAA GTTCACCGGT GCCGGCGGCA CGCTGGAGGA GACCGTCACC CGCAACAACC TCGAGGCGGC GGAGGAGATC GTCCGCCAGC TGAGGTTGCG CGACATCGGC GGGATCATCG TCATCGACTT CATCGACATG GTGCTGGAGT CCAACCGGGA CCTGGTGCTG CGCCGCCTCG TCGAGTGCCT GGGCCGCGAC CGCACCAAGC ACCAGGTGGC CGAGGTGACC TCCCTGGGCC TGGTGCAGAT GACCCGCAAG CGCACCGGCC AGGGCCTGGC GGCCGTGCTC GACGAGCTGG ACGCGGCCGC CGACGCCAAC CCCGCCCCGC AGCCCGCGCC CGGCGGGTCC TCCAGCGGCC CCGCCGCGTC CGGCGGCTCC ACCGGCGGGA ACGGGGCGGG CGGGAAGTCC CGCGCGCGCC GCGGCCGCGG GCGGGACAAG GGCGGCGAGG GCGAGGCGGA CACCGCCCGG TCCTCCGACG CCCAGCCGGG CGAGGGGGTC GCCGAGGCCG GCGGGGAGCC CCCGCGCGAG CCGGGGAAGG ACTCCGCCGT CCTGGCCGCC ATCGCGGCGG TGGCGGCGGC GGCGCGCAGC AAGGAGCGCG AGGAGTCCTC GAGCCCCGCG CCGGTGCAGG ACTGA
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Protein sequence | MRGAARTVSD RARHPAAHRC AVTAPRGGGA GEVDVAAPGE RERGRAVHCV PPSPLAGAPA AARWLLWRRR ARSLGHSGWC CRERSGRPAP AATSSGRRRP GAPGRAERAV PHCQWSSVPH TGRPARRRDR RPARGSRAAP RSSGRTSQAP RPTRWTSTAG GTSGGPRRAR ARWCTEDFRR VRDDPPGDSD QDARATVGSP VERSSRASGA PVTTTPEENA APTAEGAATA RPRRRRAASR PAGPPARVQP ESAPAEPAAP AASESTPAVE PAAEPVVEAP AVEAPAVEAP AAETPAAEVP VVETPAVEAP VEAVAAAEPA PRRRTRRATR KVAAPAETVV EPAAVAAPAE VPSEPAPAPE TAAEPVAEAP EAPAAPARRR RSRKAVAPAP LAEAPAVEAP AVPEVEAPRT EVVAVAEDAP VEETPVETPV AAAVEAPAAP APVAATAPAA PAEQPDLMDD PVLLRAAGFA QGRRAPSEGE RAADAAARAT ALFFQAPVDE APTRRSRRAS APAGPPPVSD REAPALDEDD DLLLDDLLPG ADDEAGEDAP ELDGDAPGSA EDGDEEQDED GGAPRRRRRR GGRGRRSRTR EDGEADTDEE PTEAGEVGEA RDGSDDEEPE AGASASDDED EDGEEPSGSS RRRRRRRRRS GAGETEDGSP DDPPNTVTRV REPRRPRTGA ATTGGTGEDE ITALKGSTRL EAKKQRRREG REQGRKRAIL TEAEFLARRE AVERVMVVRQ QADKTQIGVL EDGILVEHYG AKLAQTTMVG NVYLGRVQNV LPSMEAAFID VGKGRNAVLY AGEVNWDAAG LEGQPRRIEA ALKSGDPVLV QVTKDPVGHK GARLTSQVSL PGRYLVYVPR GSMTGISRKL PDTERARLKK VLKQVVPEGA GVIVRTAAEG VAEEELAADV QRLQATWEAI QAKASSKNAP VLLHGEPDLT VRVVRDVFNE DFTKLVISGD EAWETVRGYV DDVAPDLAER LERWDGGAGG AEDVFAHHRI DEQLQKALGR KVWLPSGGSL VIDPTEAMHV VDVNTGKFTG AGGTLEETVT RNNLEAAEEI VRQLRLRDIG GIIVIDFIDM VLESNRDLVL RRLVECLGRD RTKHQVAEVT SLGLVQMTRK RTGQGLAAVL DELDAAADAN PAPQPAPGGS SSGPAASGGS TGGNGAGGKS RARRGRGRDK GGEGEADTAR SSDAQPGEGV AEAGGEPPRE PGKDSAVLAA IAAVAAAARS KEREESSSPA PVQD
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