| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_3426 |
|---|
| Symbol | |
|---|
| ID | 5335452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 3549347 |
|---|
| End bp | 3550108 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | |
|---|
| Product | LmbE family protein |
|---|
| Protein accession | YP_001363153 |
|---|
| Protein GI | 152967369 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00141665 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0279283 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCCCG CCGAGACCGC CGGGCGCGCG GTGCGGGTCG TGGCGGTGTC CCCGCACCTG
GACGACGCCG CGTTCTCCGC CGGGGGGCTG CTGGCGGGGC TGGCCGCGGC GGGGGCGGAG
GTCCACGTCG TGACGGTGTT CACCGCCACC GTGCCCGGCC CCACGGGCTT CGCCCTGGCC
TGCCAGACCG ACAAGGGGCT GCCCCCCGAG GTGGACTACA TGGCGCTGCG CCGCGCCGAG
GACGCCGCCG CCACCGCGGC GCTGGGGGTG CGGGGCCGGC ACCTGCCCCT GGCCGAGGCC
CCGCACCGCG GGTACGGCAG CCCCGCGGCG CTCTTCGGCC CCGTCGCGCC CGGCGACGAG
GACGGCCCCG ACGTCGTGCG CGCCGCCCTG GCCGAGGTGC TGGACGGGTT CCCCGGCCCG
GTGGACCTGC TCCTGGGGCC GCAGGCCCTC GGCGACCACG TCGACCACCG CCACGTCCGC
GCCGCGGTGG ACGCCCTCAC CCACGACCGC GGCCTGCCGC TGGCGCGCTG GGCCGACACC
CCCTACGTGC TGCGTCCGGG CGCCGACGCC CCCGCCGGGT CCCCCCGGTA CCCGACGGGG
GAGGAGCTCG ACGCCAAGGT CGAGGCCTGC GCCGCCTACG CGACGCAGCT GGGCTTCCAG
TTCGACGGGC CGGCCGCGAT GACCCGCGCC CTGCGGGCGC TGCCGGAGAC CTTCGACCCG
CCGCTGCCGG TGCGGGCGGC GGGCCCGCAC GCCGGGGACT GA
|
|---|
| Protein sequence | MSPAETAGRA VRVVAVSPHL DDAAFSAGGL LAGLAAAGAE VHVVTVFTAT VPGPTGFALA
CQTDKGLPPE VDYMALRRAE DAAATAALGV RGRHLPLAEA PHRGYGSPAA LFGPVAPGDE
DGPDVVRAAL AEVLDGFPGP VDLLLGPQAL GDHVDHRHVR AAVDALTHDR GLPLARWADT
PYVLRPGADA PAGSPRYPTG EELDAKVEAC AAYATQLGFQ FDGPAAMTRA LRALPETFDP
PLPVRAAGPH AGD
|
|---|
| |