Gene Krad_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_3120 
Symbol 
ID5335010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp3882390 
End bp3883358 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content74% 
IMG OID 
Productpseudouridine synthase 
Protein accessionYP_001362848 
Protein GI152967064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.246679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00195827 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCCGA ACGCGCCCCG CAGCAGCGGT GGCCGAGGGC AGGGCCGCCC CCAGCGGTCC 
GGCCGCCCCC AGCCGGGCGG CGGCAAGGCG CAGGGCGGAC CGCGCGGCGC GGGCGGCAAG
GCCGCCCCGG GTGCCCGCCG CGGCTCCGCC AAGCGGATGA CCAACGACGT CAAGCCCGCG
CCCCAGCCGC CGCGCCGCGG CCCGGGCCCG ATCAAGGCCC ACCCCGGCAC CGACGTCCAC
GACCCCGAGG GCGTGCGCCT GCAGAAGGTC CTGGCCCAGG CCGGGGCCGG CTCGCGCCGC
GCCTGCGAGG AGATGATCGC CGCCGGGCGG GTCACCGTCG ACGGCGAGGT CGTCACCGAG
CTCGGCGTGC GCATCGACCC GACCCGCCAG GTCGTCCACG TCGACGGCAT GCGCTTCTCC
ATCGACGACG AGCTCGTCTA CATCATGGTG AACAAGCCCA AGGGCGTCGT CTCCACCATG
TACGACGAGG AGGGCCGGCT GAACCTGGCC GACATGGTCG GTCCGCGCGA GGAGCGGCTG
TTCCACGTGG GCCGCCTGGA CCTCGAGACC GAGGGCCTCA TCCTGCTCAC CAACGACGGC
GCGCTGACCC ACCGGCTGCA GCACCCCTCG TTCGGGGTGC AGAAGACCTA CCTCGCCGAG
GTCCGCGGGC CGGTCAAGCG CGACCTGGGC CGCAACCTGC GCGCCGGGAT CGAGCTGGAC
GACGGCCCGG TCTCGGTCGA CTCCTTCAAG CTCGTCGACT CCAAGCCGGG GTACGCGCTG
GTCGAGGTGG TCCTGCACGA GGGCCGCAAG CACATCGTGC GGCGCATGCT GGAGGCCGAG
GGCTACCCCG TCCTCAAGCT CGTCCGGGTC CAGATGGGCC CCATCGTCCT GGGCGACCTC
AAGCCGGGCA AGAACCGCCG CCTGACCCGC GGCGAGGTCC AGCAGCTGAT GGCGGTCGCG
GGCCTGTGA
 
Protein sequence
MSPNAPRSSG GRGQGRPQRS GRPQPGGGKA QGGPRGAGGK AAPGARRGSA KRMTNDVKPA 
PQPPRRGPGP IKAHPGTDVH DPEGVRLQKV LAQAGAGSRR ACEEMIAAGR VTVDGEVVTE
LGVRIDPTRQ VVHVDGMRFS IDDELVYIMV NKPKGVVSTM YDEEGRLNLA DMVGPREERL
FHVGRLDLET EGLILLTNDG ALTHRLQHPS FGVQKTYLAE VRGPVKRDLG RNLRAGIELD
DGPVSVDSFK LVDSKPGYAL VEVVLHEGRK HIVRRMLEAE GYPVLKLVRV QMGPIVLGDL
KPGKNRRLTR GEVQQLMAVA GL