Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3120 |
Symbol | |
ID | 5335010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 3882390 |
End bp | 3883358 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | pseudouridine synthase |
Protein accession | YP_001362848 |
Protein GI | 152967064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.246679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00195827 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCCGA ACGCGCCCCG CAGCAGCGGT GGCCGAGGGC AGGGCCGCCC CCAGCGGTCC GGCCGCCCCC AGCCGGGCGG CGGCAAGGCG CAGGGCGGAC CGCGCGGCGC GGGCGGCAAG GCCGCCCCGG GTGCCCGCCG CGGCTCCGCC AAGCGGATGA CCAACGACGT CAAGCCCGCG CCCCAGCCGC CGCGCCGCGG CCCGGGCCCG ATCAAGGCCC ACCCCGGCAC CGACGTCCAC GACCCCGAGG GCGTGCGCCT GCAGAAGGTC CTGGCCCAGG CCGGGGCCGG CTCGCGCCGC GCCTGCGAGG AGATGATCGC CGCCGGGCGG GTCACCGTCG ACGGCGAGGT CGTCACCGAG CTCGGCGTGC GCATCGACCC GACCCGCCAG GTCGTCCACG TCGACGGCAT GCGCTTCTCC ATCGACGACG AGCTCGTCTA CATCATGGTG AACAAGCCCA AGGGCGTCGT CTCCACCATG TACGACGAGG AGGGCCGGCT GAACCTGGCC GACATGGTCG GTCCGCGCGA GGAGCGGCTG TTCCACGTGG GCCGCCTGGA CCTCGAGACC GAGGGCCTCA TCCTGCTCAC CAACGACGGC GCGCTGACCC ACCGGCTGCA GCACCCCTCG TTCGGGGTGC AGAAGACCTA CCTCGCCGAG GTCCGCGGGC CGGTCAAGCG CGACCTGGGC CGCAACCTGC GCGCCGGGAT CGAGCTGGAC GACGGCCCGG TCTCGGTCGA CTCCTTCAAG CTCGTCGACT CCAAGCCGGG GTACGCGCTG GTCGAGGTGG TCCTGCACGA GGGCCGCAAG CACATCGTGC GGCGCATGCT GGAGGCCGAG GGCTACCCCG TCCTCAAGCT CGTCCGGGTC CAGATGGGCC CCATCGTCCT GGGCGACCTC AAGCCGGGCA AGAACCGCCG CCTGACCCGC GGCGAGGTCC AGCAGCTGAT GGCGGTCGCG GGCCTGTGA
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Protein sequence | MSPNAPRSSG GRGQGRPQRS GRPQPGGGKA QGGPRGAGGK AAPGARRGSA KRMTNDVKPA PQPPRRGPGP IKAHPGTDVH DPEGVRLQKV LAQAGAGSRR ACEEMIAAGR VTVDGEVVTE LGVRIDPTRQ VVHVDGMRFS IDDELVYIMV NKPKGVVSTM YDEEGRLNLA DMVGPREERL FHVGRLDLET EGLILLTNDG ALTHRLQHPS FGVQKTYLAE VRGPVKRDLG RNLRAGIELD DGPVSVDSFK LVDSKPGYAL VEVVLHEGRK HIVRRMLEAE GYPVLKLVRV QMGPIVLGDL KPGKNRRLTR GEVQQLMAVA GL
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