Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3060 |
Symbol | |
ID | 5334589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 3941492 |
End bp | 3942406 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | pyridoxal biosynthesis lyase PdxS |
Protein accession | YP_001362788 |
Protein GI | 152967004 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.010102 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.218232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCACCG ACAGCACTGA GCAGACCAGC GGCCCCGTCG TGGGGACCGC CCGCGTCAAG CGCGGCATGG CCGAGATGCT GAAGGGCGGC GTCATCATGG ACGTCGTCAC CGCCGAGCAG GCCCGGATCG CCGCCGACGC CGGCGCGGTG GCCGTCATGG CCCTGGAGCG GGTGCCCGCC GACATCCGCG CGCAGGGCGG CGTCTCGCGC ATGTCCGACC CCGACATGAT CGACTCGATC ATCGCCGCGG TGTCCATCCC CGTCATGGCC AAGGCCCGCA TCGGCCACTT CGTCGAGGCC CGCGTCCTGC AGTCCCTGGG CGTGGACTAC GTCGACGAGT CCGAGGTCCT CACCCCCGCC GACTACACCC ACCACATCGA CAAGCACGCC TTCACCGTGC CGTTCGTGTG CGGGGCGACG AACCTCGGCG AGGCGCTGCG CCGCATCACC GAGGGCGCGG CGATGATCCG CTCCAAGGGC GAGGCCGGCA CCGGCGACGT CTCCAACGCG GTCATGCACA TGCGCACCAT CCGCGCGGAG CTGAACCGGC TGCGCTCGAT GGAGGAGGAC GAGCTCTACG TCGCGGCCAA GGAGATGTCC GCCCCCTACG ACCTCGTGCG CGAGGTCGCG GAGACGGGCA AGCTGCCCAC CGTCCTGTTC ACCGCGGGCG GCATCGCCAC CCCCGCGGAC GCGGCGATGA TGATGCAGAT GGGCGCCGAC GGCGTCTTCG TCGGCTCCGG GATCTTCAAG TCCGGCAACC CCGCCCAGCG CGCCGAGGCC ATCGTCAAGG CGACGACCTT CCACGACGAC CCCGACGTCA TCGCCAAGGT CTCGCGCGGC CTGGGCGAGG CCATGGTCGG GCTGAACGTC GAGGAGATCC CCGAACCGCA CCGCCTGGCC CAGCGCGGCT GGTGA
|
Protein sequence | MSTDSTEQTS GPVVGTARVK RGMAEMLKGG VIMDVVTAEQ ARIAADAGAV AVMALERVPA DIRAQGGVSR MSDPDMIDSI IAAVSIPVMA KARIGHFVEA RVLQSLGVDY VDESEVLTPA DYTHHIDKHA FTVPFVCGAT NLGEALRRIT EGAAMIRSKG EAGTGDVSNA VMHMRTIRAE LNRLRSMEED ELYVAAKEMS APYDLVREVA ETGKLPTVLF TAGGIATPAD AAMMMQMGAD GVFVGSGIFK SGNPAQRAEA IVKATTFHDD PDVIAKVSRG LGEAMVGLNV EEIPEPHRLA QRGW
|
| |