Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_3048 |
Symbol | |
ID | 5336920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 3951885 |
End bp | 3954332 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_001362776 |
Protein GI | 152966992 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACG GCAGCGAGAC GCACGTCACC GCCACGACTG CGCCCGAGGC GCCGGGAACC GAGCCCACGG GCGGTCCCGC CGCGGTGCAG GGCCAGGTGG TCCCCGCGCC CGCCCCGCAG CGGCGGCCCG CCTCGGGGCG GCCCAACGGC CCCGAACGCC GGCGCGGCAC CGAGGCCCAC ACCGGCCCCG TCACCGCCGG GCGGATGCTC TCCCGCCTCG CCCGCTTCGG GCAGCACCGG CAGCAGAGCG TCTCCCCGGT GCTGGAACCG CTGCTGCGCA CGGTCTCCAA CACCCACCCC AAGGCGGACC TGTCCGTCGT GGAGAAGGCC TTCGAGCGCG CCGAGCGCGC CCACGACGGC CAGCGCCGCA AGAGCGGTGA CCCCTACATC ACCCACCCCG TCGCGGTGGC CACGATCCTC GCCGAGCTGG GCATGACGCC CTCGACGCTG GCGGCGGCCC TGCTGCACGA CACCGTCGAG GACACCGACT ACACCCTCGC CACGCTGCGC GCCGAGTTCG GCGACGAGAT CGCCCTGCTC GTCGACGGCG TCACCAAGCT CGACAAGGTC ACCTACGGCG ACGCGGCGCA GGCCGAGACC GTCCGCAAGA TGATCGTCGC GATGGCCAAG GACATCCGGG TCCTGGTCAT CAAGCTCGCC GACCGCCTCC ACAACGCCCG CACCTGGCGC TACGTCTCGG CGTCCTCGGC GGAGAAGAAG GCCCGCGAGA CGCTGGAGAT CTACGCCCCG CTGGCGCACC GGCTGGGCAT GAACACCATC AAGTGGGAGC TGGAGGACCT GTCCTTCGCG ACGGTCTACC CCAAGGTGTT CGACGAGATC GTGCGGCTGG TGGCCGACCG CGCCCCCGCC CGCGAGGAGT ACCTGCAGGG CGTGCGGGCG CAGATCGAGG ACGACCTCAA GAGCGCGCGG GTGCGCGCCA CGGTCACCGG GCGGCCCAAG CACTACTACT CGATCTACCA GAAGATGATC GTCCGCGGCC GCGACTTCGC CGAGATCTAC GACCTCGTCG GCGTGCGCGT CCTCGTCGAC TCCGTGCGCG ACTGCTACGC CGTCCTCGGT GCGCTGCACG CGCGCTGGAA CCCGGTCCCG GGCCGGTTCA AGGACTACAT CGCGATGCCC AAGTTCAACA TGTACCAGTC GCTGCACACG ACGGTCATCG GGCCCGAGGG CAAGCCCGTG GAGATCCAGA TCCGGACCCA CAACATGCAC CAGCGCGCCG AGTACGGCGT CGCGGCGCAC TGGAAGTACA AGGACGACCC CAACGCCAGC GGCGGCGGCG GGGTCCAGAA CGAGATGGAC TGGCTCAAGG CCGTCGTCGA CTGGCAGCGG GAGTCCGCCT CCAGCGACTT CCTCGACGAC CTGCGCTGGG AGATCAACGC CGGCCAGGTG TTCGTCTTCA CCCCGAAGGG CGACGTCCAG GAGCTGCCCG CGGGGTCCAC CCCGGTCGAT TTCGCCTACG CCGTCCACAC CGAGGTCGGG CACCGCACGA TGGGGGCGCG GGTCAACGGC CGCCTCGTGC CGCTGGAGTC CACCCTGGAC AACGGCGACC TGGTGGAGAT CTTCACGTCC AAGGCCGACG GGGCCGGCCC CAGCCGGGAC TGGCTGCAGT TCGTCAAGAG CCCCCGGGCG CGCAACAAGA TCAAGCAGTA CTTCTCCAAG GAGCGGCGGG AGGAGGCGAT CGAGGACGGC AAGGACGAGA TCGCCCGCGC GATGCGCAAG CAGCACCTCC CGCTGCAGCG CCTGCTCTCC CACGACTCCC TCCTCGTCGT CGCCCGCGAG CTGAACCACC CCGACGTCTC GGCCCTCTAC GCCGCCGTCG GCGAGCGCCA CGTCTCCGCC GCGCACGTCG TGGAGAAGCT CATCGCGGCC GTCGGGGGGG AGGCCGCCGT CGAGGAGGAC CTCGCCGAGG CCACCACCCC GGGTCAGACC CGGCCCACCC GCACCAGCAG CGACGCCGGG GTCGTCGTCG CGGGCGCGGA GGACGTCTGG GTCAAGCTCG CCCGCTGCTG CACCCCCGTC CCGCAGGACC CGATCGTCGG GTTCGTCACC CGCGGCGCCG GGGTCTCGGT GCACCGCGAG GACTGCGAGA ACGTGACGAT GCTGCGCAAC GAGCCCGAGC GCATCGTGGA CGTGCAGTGG GCCTCGGCCA TCGCCACCGG CCAGACCCGC CTGTTCCTGG TGCAGATCCA GGTGGAGGCG CTGGACCGGG CCCGGTTGCT CTCCGACGTC ACGCGGGTCC TCTCCGACAA CCACGTCAAC ATCCTGTCCG CGACGGTGTC CACCAGCCGG GACCGGGTGG CCCTGTCGAA GTTCTCCTTC GAGATGGCCG AGCCGAACCA CCTCAACCAG GTGCTCAACG CGGTGCGGCG GGTCGACGGC GTCTTCGACG CCTACCGCGT CATGGCGTCG CGACCGACGA AGGGCTGA
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Protein sequence | MADGSETHVT ATTAPEAPGT EPTGGPAAVQ GQVVPAPAPQ RRPASGRPNG PERRRGTEAH TGPVTAGRML SRLARFGQHR QQSVSPVLEP LLRTVSNTHP KADLSVVEKA FERAERAHDG QRRKSGDPYI THPVAVATIL AELGMTPSTL AAALLHDTVE DTDYTLATLR AEFGDEIALL VDGVTKLDKV TYGDAAQAET VRKMIVAMAK DIRVLVIKLA DRLHNARTWR YVSASSAEKK ARETLEIYAP LAHRLGMNTI KWELEDLSFA TVYPKVFDEI VRLVADRAPA REEYLQGVRA QIEDDLKSAR VRATVTGRPK HYYSIYQKMI VRGRDFAEIY DLVGVRVLVD SVRDCYAVLG ALHARWNPVP GRFKDYIAMP KFNMYQSLHT TVIGPEGKPV EIQIRTHNMH QRAEYGVAAH WKYKDDPNAS GGGGVQNEMD WLKAVVDWQR ESASSDFLDD LRWEINAGQV FVFTPKGDVQ ELPAGSTPVD FAYAVHTEVG HRTMGARVNG RLVPLESTLD NGDLVEIFTS KADGAGPSRD WLQFVKSPRA RNKIKQYFSK ERREEAIEDG KDEIARAMRK QHLPLQRLLS HDSLLVVARE LNHPDVSALY AAVGERHVSA AHVVEKLIAA VGGEAAVEED LAEATTPGQT RPTRTSSDAG VVVAGAEDVW VKLARCCTPV PQDPIVGFVT RGAGVSVHRE DCENVTMLRN EPERIVDVQW ASAIATGQTR LFLVQIQVEA LDRARLLSDV TRVLSDNHVN ILSATVSTSR DRVALSKFSF EMAEPNHLNQ VLNAVRRVDG VFDAYRVMAS RPTKG
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