Gene Krad_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_3001 
Symbol 
ID5333854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp4000001 
End bp4003315 
Gene Length3315 bp 
Protein Length1104 aa 
Translation table11 
GC content72% 
IMG OID 
Productcarbamoyl-phosphate synthase, large subunit 
Protein accessionYP_001362729 
Protein GI152966945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.105986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.458872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCC GCACCGATCT GAAGTCGGTC CTCGTCATCG GGTCCGGGCC GATCGTCATC 
GGCCAGGCCG CCGAGTTCGA CTACTCCGGC ACCCAGGCCT GCCGCGTCCT GCGCGCCGAG
GGCCTGCGGG TGATCCTGGT GAACTCCAAC CCCGCGACGA TCATGACCGA CCCGGAGATG
GCCGACGCGA CCTACGTCGA GCCCATCACC CCCGCCGTCG TCGAGGCGAT CATCGCCAAG
GAGCGCCCCG ACGCGGTCCT GGCGACCCTG GGCGGGCAGA CCGCGCTGAA CACCGCGATC
GCCCTCTACG AGAACGGCGT CCTGGAGAAG TACGGCACCG AGCTCATCGG CGCCGACGTG
GAGGCCATCA AGCTCGGCGA GGACCGCCAG CTCTTCAAGG GCGTCGTCGA GCGCTGCGGC
GCGGAGTCTG CCCGCAGCCA CCTCTGCCAC TCCATGGAGG AGGTCCTGGC CGGGGCCGCC
GACCTCGGCT ACCCCGTCGT CGTGCGCCCC AGCTTCACCA TGGGCGGGCT CGGCTCCGGC
TTCGCCTACG ACGAGGCCGA CCTGCGCCGC ATCGCCGGGC AGGGCCTGCA CCACTCCCCG
GTCACCGAGG TGCTCCTGGA GGAGTCGATC CTCGGCTGGA AGGAGTACGA GCTCGAGCTC
ATGCGCGACC GCGCCGACAA CGTCGTGGTC GTCTGCTCGA TCGAGAACTT CGACCCGATG
GGCGTGCACA CCGGCGACTC CATCACCGTC GCCCCCGCGA TGACGCTGAC CGACCGCGAG
TACCAGCGGA TGCGCGACAT CGGCATCGCC GTCATCCGCG AGGTCGGCGT CGACACCGGC
GGCTGCAACA TCCAGTTCGC GGTGAACCCC GAGGACGGGC GCATCATCGT CATCGAGATG
AACCCGCGGG TCTCGCGCTC CTCGGCGCTG GCCTCGAAGG CGACCGGGTT CCCCATCGCC
AAGATCGCCG CGCGCCTCGC CGTCGGCTAC ACCCTCGACG AGATCCCCAA CGACATCACC
TCCTCCACCC CGGCCAGCTT CGAGCCCACG CTCGACTACG TCGTGGTGAA GGTCCCGCGG
TTCGCGTTCG AGAAGTTCCC CGCCGCCGAC CCGACGCTGA CGACGACCAT GAAGAGCGTC
GGCGAGGCGA TGGCCCTGGG CCGCAACTTC ACCGAGGCGC TGCAGAAGGC GCTGCGCAGC
ACCGAGAAGC GCGGCGCGAC GTTCTCCTGG GCGGGTGAGC CGGGCGACCG CGCGGACCTG
CTGCGCCGGG CCGCGCAGCC CACCGACGAG CGCATCGGCC TGGTCATGCA GGCCATCCGC
GCCGGCGCCA CCCCGGAGGA GCTGTTCGAG TCCACCCGGA TCGACCCCTG GTTCCTCGAC
CAGATGTTCC TGCTCGACGA GATCGCCGGG GAGGTCCGCG ACAGCGACGA GCTCACCCCC
GAGCTGCTGC GCCACGCCAA GCGCCACGGC TTCTCCGACG CCCAGATCGG CGAGCTGCGC
CACCTGCCCG AGGACGTCGT GCGCGGGGTC CGGCACGCGC TGGGGATCCG CCCGGTCTAC
AAGACCGTCG ACACCTGCGC GGCCGAGTTC GCGGCCAGCA CGCCCTACCA CTACTCCTCC
TACGACGAGG AGGACGAGAC CCGCCCCCGC GAGAAGGCGG CCATCGTCAT CCTCGGCTCC
GGCCCCAACC GGATCGGGCA GGGCGTGGAG TTCGACTACT CCTGCGTCCA CGCCAGCTTC
GCCCTGCGCG ACGCCGGCTA CGAGACCGTC ATGGTCAACT GCAACCCCGA GACGGTCTCC
ACCGACTACG ACACCTCCGA CCGCCTGTAC TTCGAGCCCC TCACCCTCGA GGACGTCCTC
GAGGTCGTGC ACGCCGAGAT GCGCTGCGGG CCGGTCGCGG GCGTCATCGT CCAGCTCGGC
GGGCAGACCC CGCTGGGGCT GGCGGCGAAG CTGGAGCAGG CGGGGGTGCC GATCATCGGG
ACCTCCCCGC AGGCCATCGA CCTCGCCGAG GAGCGCGGGG CGTTCGGGCA GGTCCTCGAG
CGCGCCGGCC TCGTCGCGCC CAAGCACGGG ACGGCGTCGA GCTTCCCCGG GGCCAAGGCC
ATCGCCGCGG GCATCGGCTA CCCCGTCCTG GTCCGCCCCA GCTACGTCCT GGGCGGGCGC
GGGATGCAGA TCGTCTACGA CGAGGCCTCC CTGGAGGAGT ACATGCGGAC CGCGACCGAG
GTGTCGCCGG AACGCCCCGT CCTCGTCGAC CGCTTCCTCG ACGACGCCAT CGAGATCGAC
GTCGACGCCC TGTTCGACGG CGAGGAGATG TACCTCGGCG GGATCATGGA GCACATCGAG
GAGGCCGGGA TCCACTCCGG CGACTCCGCC TGCGTCATCC CGCCCCCGAC GCTGGGCAAC
GCCGAGCTCG CCCGGGTCCG CGCGGCCACC GAGGCCATCG CCCGCGGGGT CGGGGTCCGG
GGCCTGCTGA ACGTGCAGTT CGCCCTCGCC GCCGACGTCC TCTACGTCCT GGAGGCCAAC
CCGCGGGCCT CGCGCACCGT GCCGTTCGTC TCCAAGGCGA CGGGGGTGGC GCTGGCCAAG
GCCGCCGCGC GGCTCATGGC GGGGACCTCG ATCCGGGACC TGCGCGCCGA GGGCCTGCTC
CCCGGCCGCG GCGACGGCGG GCTGCTGCCG GCCGACTCCC CGGTCTCGGT GAAGGAGGCC
GTGCTGCCCT TCGCGCGGTT CCGCACCGCC GAGGGCGTCG TGGTGGACTC CCTGCTCGGG
CCGGAGATGC GCTCCACCGG CGAGGTCATG GGCATCGACG TCGACTTCCC CACGGCCTTC
GGGAAGTCGC AGACCGCCGC CTACGGCGGG CTGCCCACCG CGGGGACGGC GTTCATCTCC
GTCGCCGACC GCGACAAGCG GGCGATGATC TTCCCGATCA AGCGGCTGGC CGACCTCGGG
TTCACCCTCG TCGCCACCGA GGGCACCGCC CAGGTGCTGC GCCGCAACGG CATCACCTCC
ACCGTGGTGC GCAAGCACTC CGAGGGCACC AGCGAGGACG GCGAGCTCAC GATCGTCGGG
CGCATCGGCG CGGGGGAGAT CGCCATGGTC GTCAACACCC CGTCGGGCAA CCAGGCCCGC
GCCGACGGCT ACGAGATCCG CGCCGCCGCG ACCGCCGTCG GCTCCCCGAT CATCACCACG
ATCCAGGAGC TGTCCGCCGC GGTGCAGGCC ATCGAGGCCG CGATCGTCCA GGAGCGCAAC
GGCGGGGGCG TGAACGTCGC GTCCCTGCAG GAGCACACCG CCCGGCTCAA CGCCGCCTGG
GAGGGCCGGG CGTGA
 
Protein sequence
MPRRTDLKSV LVIGSGPIVI GQAAEFDYSG TQACRVLRAE GLRVILVNSN PATIMTDPEM 
ADATYVEPIT PAVVEAIIAK ERPDAVLATL GGQTALNTAI ALYENGVLEK YGTELIGADV
EAIKLGEDRQ LFKGVVERCG AESARSHLCH SMEEVLAGAA DLGYPVVVRP SFTMGGLGSG
FAYDEADLRR IAGQGLHHSP VTEVLLEESI LGWKEYELEL MRDRADNVVV VCSIENFDPM
GVHTGDSITV APAMTLTDRE YQRMRDIGIA VIREVGVDTG GCNIQFAVNP EDGRIIVIEM
NPRVSRSSAL ASKATGFPIA KIAARLAVGY TLDEIPNDIT SSTPASFEPT LDYVVVKVPR
FAFEKFPAAD PTLTTTMKSV GEAMALGRNF TEALQKALRS TEKRGATFSW AGEPGDRADL
LRRAAQPTDE RIGLVMQAIR AGATPEELFE STRIDPWFLD QMFLLDEIAG EVRDSDELTP
ELLRHAKRHG FSDAQIGELR HLPEDVVRGV RHALGIRPVY KTVDTCAAEF AASTPYHYSS
YDEEDETRPR EKAAIVILGS GPNRIGQGVE FDYSCVHASF ALRDAGYETV MVNCNPETVS
TDYDTSDRLY FEPLTLEDVL EVVHAEMRCG PVAGVIVQLG GQTPLGLAAK LEQAGVPIIG
TSPQAIDLAE ERGAFGQVLE RAGLVAPKHG TASSFPGAKA IAAGIGYPVL VRPSYVLGGR
GMQIVYDEAS LEEYMRTATE VSPERPVLVD RFLDDAIEID VDALFDGEEM YLGGIMEHIE
EAGIHSGDSA CVIPPPTLGN AELARVRAAT EAIARGVGVR GLLNVQFALA ADVLYVLEAN
PRASRTVPFV SKATGVALAK AAARLMAGTS IRDLRAEGLL PGRGDGGLLP ADSPVSVKEA
VLPFARFRTA EGVVVDSLLG PEMRSTGEVM GIDVDFPTAF GKSQTAAYGG LPTAGTAFIS
VADRDKRAMI FPIKRLADLG FTLVATEGTA QVLRRNGITS TVVRKHSEGT SEDGELTIVG
RIGAGEIAMV VNTPSGNQAR ADGYEIRAAA TAVGSPIITT IQELSAAVQA IEAAIVQERN
GGGVNVASLQ EHTARLNAAW EGRA