Gene Krad_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_2948 
SymbolrpsA 
ID5337661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp4057955 
End bp4059472 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content67% 
IMG OID 
Product30S ribosomal protein S1 
Protein accessionYP_001362676 
Protein GI152966892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.188906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA CCACGACCGC GCCGGCGGGC ACCACTCCTC AGATCGCGAT CAACGACATC 
GGGTCGGCTG AGGACTTCCT TGCCGCGGTC GACGCGACCA TCAAGTACTT CAACGACGGT
GACATCGTCT CCGGCACCAT CGTGAAGGTC GACCGTGACG AGGTCCTCCT CGACATCGGT
TACAAGACCG AGGGCGTCAT CCCCTCGCGC GAGCTCTCGA TCAAGCACGA CGTCGACCCC
AACGAGGTCG TCGGAGTCGG CGACGAGGTC GAGGCCCTGG TCCTCCAGAA GGAGGACAAG
GAAGGCCGTC TGATCCTGTC CAAGAAGCGC GCCCAGTACG AGCGCGCCTG GGGCACGATC
GAGGCCAAGA AGGAAGCCGA CGAGGTCGTC GAGGGCGTCG TCATCGAGGT CGTCAAGGGC
GGCCTCATCC TCGACATCGG TCTGCGCGGC TTCCTGCCCG CGTCCCTCGT CGAGATGCGT
CGCGTCCGCG ACCTGCAGCC CTACGTGGGC AAGACGATCG AAGCCAAGAT CATCGAGCTG
GACAAGAACC GCAACAACGT GGTCCTGTCC CGCCGCGCCT GGCTCGAGCA GACCCAGTCC
GAGGTCCGCC AGAACTTCCT CACGACCCTG CAGAAGGGTC AGGTCCGCTC CGGCGTCGTC
TCCTCGATCG TCAACTTCGG CGCGTTCGTG GACCTGGGTG GCGTCGACGG TCTCGTCCAC
GTCTCCGAGC TGTCCTGGAA GCACATCGAC CACCCCTCCG AGGTCGTCGA GGTCGGCCAG
GAGGTCACCG TCGAGGTCCT CGACGTCGAC ATGGACCGCG AGCGCGTGTC CCTGTCGCTG
AAGGCGACCC AGGAAGACCC GTGGCAGCAG TTCGCCCGGA CCCACGCGAT CGGTCAGGTC
GTGCCGGGCA AGGTCACCAA GCTCGTCCCG TTCGGTGCGT TCGTGCGCGT CGACGACGGC
ATCGAGGGCC TGGTCCACAT CTCCGAGCTG GCCGAGCGCC ACGTCGAGGT GCCCGAGCAG
GTCGTCCAGG TCAACAGCGA CATCTTCGTC AAGGTCATCG ACATCGACCT CGAGCGTCGC
CGGATCTCGC TGTCGCTGAA GCAGGCCACC GAGTCCCTCG CCGCGGCCGG CGAGGAGTTC
GACCCCTCGC TCTACGGCAT GGCCGCGGAC TACGACGAGC AGGGCAACTA CAAGTACCCC
GAGGGCTTCG ACCCCGAGAC CAACGACTGG CTCGAGGGCT TCGAGGCCCA GCGCGAGGAG
TGGGAGGGGC AGTACGCCCT GGCCCACGAG CGCTGGGAGC AGCACAAGAA GCAGGTCGCG
GAGGCCGCCG AGGCCGAGGC GAAGGCCGAG GCGGAGGGTG TCACCGCGGC GACCAGCAGC
AGCTCGAGCT CCAGCTCCAG CAGCAGCTCC TCGTCCGCTC CCTCCTCCTA CACCTCCGAG
GCTCCGGAGG CCGCGGGCAC GCTCGCGTCC GACGAGGCCC TGGCGGCCCT GCGCGAGAAG
CTCACCGGCG GGAACTGA
 
Protein sequence
MTTTTTAPAG TTPQIAINDI GSAEDFLAAV DATIKYFNDG DIVSGTIVKV DRDEVLLDIG 
YKTEGVIPSR ELSIKHDVDP NEVVGVGDEV EALVLQKEDK EGRLILSKKR AQYERAWGTI
EAKKEADEVV EGVVIEVVKG GLILDIGLRG FLPASLVEMR RVRDLQPYVG KTIEAKIIEL
DKNRNNVVLS RRAWLEQTQS EVRQNFLTTL QKGQVRSGVV SSIVNFGAFV DLGGVDGLVH
VSELSWKHID HPSEVVEVGQ EVTVEVLDVD MDRERVSLSL KATQEDPWQQ FARTHAIGQV
VPGKVTKLVP FGAFVRVDDG IEGLVHISEL AERHVEVPEQ VVQVNSDIFV KVIDIDLERR
RISLSLKQAT ESLAAAGEEF DPSLYGMAAD YDEQGNYKYP EGFDPETNDW LEGFEAQREE
WEGQYALAHE RWEQHKKQVA EAAEAEAKAE AEGVTAATSS SSSSSSSSSS SSAPSSYTSE
APEAAGTLAS DEALAALREK LTGGN