| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_2291 |
|---|
| Symbol | |
|---|
| ID | 5337126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 4693229 |
|---|
| End bp | 4696033 |
|---|
| Gene Length | 2805 bp |
|---|
| Protein Length | 934 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | regulatory protein LuxR |
|---|
| Protein accession | YP_001362036 |
|---|
| Protein GI | 152966252 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGGCC GAGAACGTGA GCTGGCGGAG CTGCGTGAGC TGCTCGAGCT CGTCATGGCC
GCCGGGAGCG GTCGCGCGGT GGTGGTCGAA GGTGAGCCCG GCATCGGCAA GAGCGCGCTG
GTCGCCGCTC TGACCGGCGT GGCTGTCGCG GCGGGCTTCC AGCCGTTGCG GTGCGCGGGC
TTCCAGCGCC AGGCTCTGGT GGGTTTCGCC GCGCTGCACG AGCTGGTGCA TCCGGTGCTG
GACCGGGTCC CCGCGCTGCC CCCTCGCCAG CGGGCGGCGT TGTTGACCGC CTTCGGCCTG
CAAGAGGGAC CCGCGCCGGA CCGGCTGCTC ATCGCCCTTG CGGTGCTGGG GCTGCTGGAG
GAGGTGGCCG CCACTCGGCC GCTGCTGCTC GTCGTGGAGG ACGCCCAGTG GTTGGACGTC
TCCAGCGCGG GGGTGGTGGG TTTCGTCGCC CGGCGACTGC ACACGGCCCC GATCGCCCTG
GTGGCCACCA CCCGCACCAC CAGCGGCGGC GAGGTCGCCC TCGAGCGCAC CCGCGAGGTG
CTGAACCTCG GCGGTGCCGA GCACCTGCAC GTGCCGCCGC TGTCGGCCGA GCACTCCGAG
CGGCTCCTGA GCACCCTGGA CACGCCGCCC GCCGTCTTGA CCCGCGCCGT GCGGCAACGG
GTGCTCGAGG AGGCGGGCGG GAACCCGCTG GCGCTGCGCG AGTTCGTTCA CGCTCAGCGC
GCCCGCGGCG GGGACGAGGC GGTGCCCCTG GGTGTGCCGC TGCCCACCAC CCGCCGCCTG
GAGGCGGCGT ACCTCGCCGA GGTGGCCGAC CTGCCAGCCG CCAGCGGTAC CTTGCTGCTG
TTGGCCGCCG CCGGTGAGGA GCTCACCCTG CCGGAGCTGC TCGCGGCCGG ACACGAGCTG
GGGCTGACGC CCCAGGACTT GATCCCGCTG GAGCGGACGG ACCTGGTGAG CGTCGTGGCG
GACCGGCTGC AGCTGCGCCA CCCCCTGCTG CGCTCGGCCA TCTACGGCGC GGCGTCCTCG
ATCGAGCGCA TCGAGGCGCA CCGGGTGCTC GCCGGAGCCG TGCGCGACGG CAGCCGGGCC
GCCTGCCACC GGGCCGCGGC CACCGTGGAG CCCGACGAGT CCGTGGCCGC CGAGCTGGAA
GCCGCCGCCA CCCGGGGAGC GCAGCGCGGG GCGCGGGCCG AAGCGGCCGC CGCCTTGCGC
CGAGCCAGCG AGCTGTCGGT GCAGGGGGAG GACCAAGCGC GACGCATGGT GCAGGCAGCC
GAGCTGGCCC GCCAGGCCGG CAGCCTGGCC CAGGCCGAGC AGATCCTCAC CGAGATGCTG
ACCCTGCCCA TGTCGCCGCA GCACCGCGCC GAGCGGACGC ACGTGCGGCG CCTGCTGGGG
TACTACCAGG GCGAAGACCA CAGCGACCCC AGCGACGAGC TCGCCTACGC GCGGGAGCTC
GCCGGGCCCT CCGGCACCGA ACACCCCGAG GAGCGCATCA CCATCCTGAC CACCGTGGCG
TTCGGCGTCA TCCACCACTA CAGCGGTGAC CTCGCCGTAG ACGAAGCGGT GCGGCGTCGC
GTGCACGACG AGCTGGCCGC GGTGAAGCCG CCGAGCTGGA GCGGTCCGCA GCAGCTGGGG
CTGGCGGTGC TCGACCCGCT GGCGCACGCG GCAGCAGTGC GGCCCGCGCT GCCCCGGATC
CTGCAGCAGC CGCCGCCGGT GTTCTTCTTC CTGCTCTCCG TCGCGATGAC GGCGGAACTC
CTGCAGGACC TGCCCACGGC ACGTCGGGCG TGGATCATGG CCGCCGAGGC GTTCCAGCGC
GCGGGCTCCT CCAGCGACGT CGTCCGGGCG TTGGACGCGC TGGCCGTCCT GCACGTCATC
GCCGGGGACC TGTCCGAGGC GCTGGCCACG GCGGAGCAGG CCCGGCGCAC GGCCCTGGAC
CTCGAGTTCC CGCTGGTCGC GGCGTCCGCG GAGGCCACCG CGGCCCAGGT GCACGTGTGG
ACCGGGCATC CGACGCTGGC GACCGAGGCG CTGGGGCGCA GTCGGGCGCT GCTCACCGGA
GCCCGGATCC CGAACGTGAC GGCGGGCATA GCCTGGGCGG CCGGGTCGCT AGCGCTGCAC
GAGGGGCGTC CCCTCGATGC CGTGGCTGAA CTGCGCGGGG TCGTCGTGGA TCGCGCCTAC
GCGCAGTGGG CGGTGGCGGA TCTGACCGAG GCCGCCGTGC GTGCGGGCGA ACCGGAATCG
GCTCGCGAAC TCCTCGCGGA CGCCGAGGAG GCCGCTCGCG AGCTCGGCTC GCCGCACCTG
CAGATGCTGG TGCACCGCAG CCGGGCCCTA CTGGCCGACG GGGGCGAGGC GGAGGGGCAT
TACGAGGCCG CGCTCGCCGC GGGCGCCCAC AGCGACGCCC CCCTGGAACT GGCCCGCACC
CACCTGCTCT ACGGCGAGTG GTTGCGCCGG GCGCGACGGG TGCTGGAGGC GCGCGAGCAC
CTGACCGTCG CGCTCGAGGC GCTGCACGCG GCCGGTGCCG GGGCAGGTCC CCTGGCCCTG
CGGGCCTCGG CCGAGCTCGC GGCCGCCGGC GCCGTCCCCG CGAGCCGTCC GGCCCCGCCA
ACCGCACCCT CGTCGCCCAC CGCCTCGTCG CTGACCGCGC AGGAGCTGCA GATCGCCCGG
CTGGCGGCGC AGGGATTGAC GAACAAGGAG ATCGCCGACC GGATCTACCT CTCACACCGC
ACCGTGTCCA CGCACCTCTA CAAGGTGTTC CCCAAGCTCG GCATCACCAA CCGCCGTCAG
TTGCGCGAGG TGCTGCTCGG TGATGGTTCC TCTGCCTCGA GGTGA
|
|---|
| Protein sequence | MIGRERELAE LRELLELVMA AGSGRAVVVE GEPGIGKSAL VAALTGVAVA AGFQPLRCAG
FQRQALVGFA ALHELVHPVL DRVPALPPRQ RAALLTAFGL QEGPAPDRLL IALAVLGLLE
EVAATRPLLL VVEDAQWLDV SSAGVVGFVA RRLHTAPIAL VATTRTTSGG EVALERTREV
LNLGGAEHLH VPPLSAEHSE RLLSTLDTPP AVLTRAVRQR VLEEAGGNPL ALREFVHAQR
ARGGDEAVPL GVPLPTTRRL EAAYLAEVAD LPAASGTLLL LAAAGEELTL PELLAAGHEL
GLTPQDLIPL ERTDLVSVVA DRLQLRHPLL RSAIYGAASS IERIEAHRVL AGAVRDGSRA
ACHRAAATVE PDESVAAELE AAATRGAQRG ARAEAAAALR RASELSVQGE DQARRMVQAA
ELARQAGSLA QAEQILTEML TLPMSPQHRA ERTHVRRLLG YYQGEDHSDP SDELAYAREL
AGPSGTEHPE ERITILTTVA FGVIHHYSGD LAVDEAVRRR VHDELAAVKP PSWSGPQQLG
LAVLDPLAHA AAVRPALPRI LQQPPPVFFF LLSVAMTAEL LQDLPTARRA WIMAAEAFQR
AGSSSDVVRA LDALAVLHVI AGDLSEALAT AEQARRTALD LEFPLVAASA EATAAQVHVW
TGHPTLATEA LGRSRALLTG ARIPNVTAGI AWAAGSLALH EGRPLDAVAE LRGVVVDRAY
AQWAVADLTE AAVRAGEPES ARELLADAEE AARELGSPHL QMLVHRSRAL LADGGEAEGH
YEAALAAGAH SDAPLELART HLLYGEWLRR ARRVLEAREH LTVALEALHA AGAGAGPLAL
RASAELAAAG AVPASRPAPP TAPSSPTASS LTAQELQIAR LAAQGLTNKE IADRIYLSHR
TVSTHLYKVF PKLGITNRRQ LREVLLGDGS SASR
|
|---|
| |