| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1782 |
|---|
| Symbol | |
|---|
| ID | 5334696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | + |
|---|
| Start bp | 454079 |
|---|
| End bp | 455725 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| Protein accession | YP_001361532 |
|---|
| Protein GI | 152965748 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.638114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGGGG GCGCGGGGTG GCTCAATGAC CCCGTGACGG CAACCCCCGC GACGCACGGC
CCGCACCGGC GGCCTCCCCC CTCGACGCGC GCGGTCGCCC TCTCCGAGCT GCGCGGCGTG
CTCGGGCTGC CCCCCGGGGC CGGTCCCGCC GACCCGTCCG GAGCCGATCC CGCGGTGCGC
GGGGTGACCC TGGACTCCCG GCACGTCCTG CCGGGCGACC TCTACGCCGC CCTGCCCGGT
GCGCGGCACC ACGGCGCGCA GTTCGCCGGG CAGGCCCGGG CGAGCGGTGC GGCGGCCGCG
CTCAGCGACC GCCCCCTGCC GGGGTTGCCC ACCCTGGTCG TCCCCGACCC GCGGGCGGTC
CTGGGCCCCC TCGCCGCCCA CCTGCACGAC CACCCCAGCC ACCACCTGGA GGTGTACGGC
GTCACCGGCA CCAACGGCAA GACGAGCACC ACCCACCTGC TGGACGCCGG GTTGCGCTCC
GCGGGCCACC GGACGGGCAT GATCAGCGGG ATCCGGGTCC GCACCCCGGA GTGGTCGCGG
CCGGCCCAGC GCACCACGCC CGAGGCGCCG GAGCTGCAGG AGACGCTGGC CGCCCTGCGC
GAGCAGGGGG CCACCAGCGC CGCGGTGGAG GTCTCCAGCC ACGGCCTCGC CCTGCACCGG
GTCGACGGCA CCCGCTTCCG CGCGGCGGTG TTCACCAACC TCGGCCGCGA CCACCTGGAC
CTGCACGGGG ACCAGGAGTC CTACTTCGCG GCCAAGGCCT CCCTGTTCGC ACCCCACCGC
TGCGCCCTGG CGGTGGTCAA CGTCGACGAC GCCCACGGCC GGCGGCTGGC CGCGCAGGTG
CGCGTCCCCG TCACGACGTT CTCGGCGGCG GGCCGGCGCG AGGCCGACTG GCGCGCCACC
GAGGTCCGCG CCGACGCCGA CCGCACCTCC TTCCGGCTGC TGGGCCCGGG CACGGACCGG
CGGGTGCGGC TGCACCTGCT GGGGACCCAC CAGGTCGACA ACGCCCTGGG GGCCGTCGCC
GCCCTGCACG CCGGCGGCCT CAACGTGGAG GACGTCCTGC GCGGGATGGA GGACCTGACC
GCGGTCAGCG GGCGGCTGCA GCGGATCGAC GAGGGCCAGC CGTTCCTGGC GCTGGTCGAC
TACGCGCACA ACGTCGCCGC CCAGCGGCGC CTGCTCCCCT TCCTGCGGAC CCTGACCGGC
GGGCGCCTGG TGGTCGTCCT GGGCGCCACC GGCGAACGGG ACCCCGGCAA GCGCGGGCCG
CTGGGGCGCA CCGCGGCCCA GCTGGGCGAC GTGGTCATCG TCACCGACGA GAGCCCCCAC
GACGACGACC CCGCCGCGCT GCGCGAGGCC GTGGCCGGCG GCGCCCGGGG CGCCGCCTCG
GCCCAGGTGC ACGTGGAGGC CGACCGCGAC CGGGCGATCC GGCTGGCCGT GTCCCTGGCC
GACCCCGGCG ACGTCGTCGT CGTCAGCGGC CGCGGTCACG ACGGGCAGCT CGTGGCCGGG
GGACGGACCC GCGCCTTCGA CGACGGCGCG CGGCTGCGGG CGGCGCTGGC GCAGCTGGCC
CGCGGAGGCC GGGCGCCGAC GGTGCTGCTG CCGGAGGATC AGGTGCGGAA GTCGATGGTG
GCCCGGCCGC CGTGCTCGTC GAGGTAG
|
|---|
| Protein sequence | MVGGAGWLND PVTATPATHG PHRRPPPSTR AVALSELRGV LGLPPGAGPA DPSGADPAVR
GVTLDSRHVL PGDLYAALPG ARHHGAQFAG QARASGAAAA LSDRPLPGLP TLVVPDPRAV
LGPLAAHLHD HPSHHLEVYG VTGTNGKTST THLLDAGLRS AGHRTGMISG IRVRTPEWSR
PAQRTTPEAP ELQETLAALR EQGATSAAVE VSSHGLALHR VDGTRFRAAV FTNLGRDHLD
LHGDQESYFA AKASLFAPHR CALAVVNVDD AHGRRLAAQV RVPVTTFSAA GRREADWRAT
EVRADADRTS FRLLGPGTDR RVRLHLLGTH QVDNALGAVA ALHAGGLNVE DVLRGMEDLT
AVSGRLQRID EGQPFLALVD YAHNVAAQRR LLPFLRTLTG GRLVVVLGAT GERDPGKRGP
LGRTAAQLGD VVIVTDESPH DDDPAALREA VAGGARGAAS AQVHVEADRD RAIRLAVSLA
DPGDVVVVSG RGHDGQLVAG GRTRAFDDGA RLRAALAQLA RGGRAPTVLL PEDQVRKSMV
ARPPCSSR
|
|---|
| |