Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1525 |
Symbol | |
ID | 5337476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | + |
Start bp | 684464 |
End bp | 685150 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | SNARE associated Golgi protein |
Protein accession | YP_001361277 |
Protein GI | 152965493 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.365911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00841691 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCACCA CCCTGAGCCC GACCGCTCTC GCCGCGACGA CGAGCGGGGG CTCGACCGGT CAGACCGGAG GGCTCACCGG GTTCGTCCTC GACACCGTCG ACGCCCTGGG GGCGCCCGGG GTGGGGTTGA TGAGCTTCCT GGAGGTCGTC TTCCCGCCCA TCCCCAGCGA GGTCGTCCTG CCGCTGGCGG GGTACCAGGT GCAGCAGGGG CGCATCGACC TCGTCGCGGT CGTGCTGTTC TCGATCGCCG GGGCCTTCCT GGGCTCCCTG CTCCTGTACT GGGTGGGCAA GGTCATCGGG CTGGACCGCG CCGCCCGCAT CGCCGACCGG ATCCCGCTGA TGGACGCCTC CGACGTCACG AAGTCCGCGG AGTGGTTCCA CCGCCACGAG GGGGCGGCGG TGTTCACGGG CCGGTTCGTG CCGGGGGTGC GCAGCCTGAT CTCGCTGCCG GCGGGGGCGG CCCGGATGCG CCTGCTGAAG TTCTCGGTCC TGACCGTCCT GGGCAGCGGG CTGTGGAACG GCCTGCTCAT CGCGCTGGGC CTGGCGCTGG GCACGCAGTA CGAGCTGGTC GAGGAGTACG GTCACTACCT CGACTACGTC TTCTACGCCG CGATCGCGGC CGTGCTGGCG TGGGCCGTGG CCCGCCGCGT GCGCAGCCGG CGCCGCGAGG GCGCCGGCAC CCGCTGA
|
Protein sequence | MSTTLSPTAL AATTSGGSTG QTGGLTGFVL DTVDALGAPG VGLMSFLEVV FPPIPSEVVL PLAGYQVQQG RIDLVAVVLF SIAGAFLGSL LLYWVGKVIG LDRAARIADR IPLMDASDVT KSAEWFHRHE GAAVFTGRFV PGVRSLISLP AGAARMRLLK FSVLTVLGSG LWNGLLIALG LALGTQYELV EEYGHYLDYV FYAAIAAVLA WAVARRVRSR RREGAGTR
|
| |