| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_1006 |
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| Symbol | |
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| ID | 5334417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kineococcus radiotolerans SRS30216 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009664 |
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| Strand | + |
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| Start bp | 1270758 |
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| End bp | 1272563 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 80% |
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| IMG OID | |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001360758 |
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| Protein GI | 152964974 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.155434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00194225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGGACG ATCGCGCCGG GCCCGCCGAC CGGTCCTCAC CCTCCGTGAC GACTCACCCG
TTCGGGCTCA AGTCCGCGAC CCGACGTGCC GACGTCGTCC CGGTGACCCC CCTGCGCACC
GACCCCGCGA CGGCCGCTCC CGTCGACCTG GACCGCGTGC TGGGCGAGGA CGCGCTGCGC
ACGGTCTTCC AGCTCGTCGT CGACCTGGAC TCCCGGCGCC CGGTGGCCGT CGAGGCCCTG
GTCCGGGGCC CGCGCGGCTC CGGCCTGGCC ACCCCCGGGC AGCTCTTCGA CGCGGCCGCG
CGCACCGGCC GGCTCGCGGA GCTCGACCGC GCCTGCCTGC GGACGGCGCT GCGCGCGGCG
ACCGGCGCGG GGCTGGCCGC GCCCTGGACG CTGTTCCTCA ACGGCTCCCC CGACCAGGAG
CTCCCCGCGG AGCTCACCGC CGGGGTCGCC GGCGCCCGGC CCGTCGTGGT CGACCTCACC
GAGCGCGCGC TCACCACCCG CCCCGGGCAG GTCCTGCGCG CCGCGGCCGG GCTGCGCGCC
CGCGGCCTCG GCGTGGCCCT CGACGACCTC GGCGCCGACC CCGCCGCCCT GGCCCTGCTG
CCCCTGCTGC GGCCCGACGT CGTCAAGCTC GACCTGCGCC TGCTGGCCGC GCGCCCCGAG
GCCGAGGTCG CCGCGATCGT CCAGGCCGTG TCCGCGCAGG CCGAGCGGGA CGGGACGACC
GTCCTGGCCG AGGGCGTCGA GACCGAGGAG CACCTGCGCA CCGCCCGGGC CCTGGGCGCC
ACGCTGGGCC AGGGGTGGCT CTTCGGACGC CCGGCCGCGC TGGGCGACCT CCTGGCCCGC
ACCCCCGTCC CCGCGCACCC GCTGCCCGTG CTGCCCCCCG CCGGTCCCGG CGGGGACGGC
CCCACCCCCT TCGCGGCGCT GGAACGGCGC CGGCCCGCGC GCCGGGCGGG GACCGACGTG
GTCGAGGAGG CGCTGCGCCA CCTGGAGCGG CACGCGCTGC GCGGCGTCGA GCCGTCGACC
GTCGTCGGCG TGGGCGCCAC CTCCCCCGAG CGGGCCGCGC GGCACGAGCA GCTCGCCCGC
CGCGCCGGGT TCGCGCTGAG CCTGCCCGGC GCCGACGGGC GCGGCGAGGA CGTGCGCGGC
ACCGTCGTCC TGGGGCCGCA CTTCGCCGGG GCCGTCCTGG CCCGCCCCGT CGCCGGCACC
GGGGAGTTCG ACCTCGTCGT CTCCCACGAC CGCGCCCTCG TCACCGCGCT GGTCACCGAC
CTCGTCCGGG ACGCGCCGGA CCACGTTCCC GTCCCCGTCA CCGCCCCCGT CACCGCCCCC
GTCCTCGCCC ACCGGCCCGC GGTCGAGGCC GGACCGCCGG CGGCGGGACT CGGCGAGCAG
GTGGGCGAGG CCCTGGAGGA GGGCCGCCGG GCCGGCACCG GGACCGGGCT GCTGGTCGTC
GGCGTCGACG CCGCCGTCGG GACCGAGGGG CGGTGCGGGC CCGCGCGCGC GGAGGTCGTC
CGCCGGATGC GCCGGGCGGT GCGCTCGGTG GACCGGTGGC TGCCGGTGGG GCCGGACCTG
TTCGCCGTCC TGCTGACCGG GCTGCCCCGC TCCGGCAGCG AGGGGGTCGT GGAACGCGTC
GCCGACGCCC TGCTGATGGC GGTGGAGACC TCGATGGACT CCCACCCCGA CGTCTCGGTG
AGCATCGGGG CGAGCCTGGC CCCGACCCGC GCCCACACCG GGGCGGAGGC GCAGCGGCAG
GCGCTGGCCG CGCTCGACGC GGCGCGCCGC GCGGGTGGGC ACTGCGCGCG GATCTGGCTG
GTCTGA
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| Protein sequence | MSDDRAGPAD RSSPSVTTHP FGLKSATRRA DVVPVTPLRT DPATAAPVDL DRVLGEDALR
TVFQLVVDLD SRRPVAVEAL VRGPRGSGLA TPGQLFDAAA RTGRLAELDR ACLRTALRAA
TGAGLAAPWT LFLNGSPDQE LPAELTAGVA GARPVVVDLT ERALTTRPGQ VLRAAAGLRA
RGLGVALDDL GADPAALALL PLLRPDVVKL DLRLLAARPE AEVAAIVQAV SAQAERDGTT
VLAEGVETEE HLRTARALGA TLGQGWLFGR PAALGDLLAR TPVPAHPLPV LPPAGPGGDG
PTPFAALERR RPARRAGTDV VEEALRHLER HALRGVEPST VVGVGATSPE RAARHEQLAR
RAGFALSLPG ADGRGEDVRG TVVLGPHFAG AVLARPVAGT GEFDLVVSHD RALVTALVTD
LVRDAPDHVP VPVTAPVTAP VLAHRPAVEA GPPAAGLGEQ VGEALEEGRR AGTGTGLLVV
GVDAAVGTEG RCGPARAEVV RRMRRAVRSV DRWLPVGPDL FAVLLTGLPR SGSEGVVERV
ADALLMAVET SMDSHPDVSV SIGASLAPTR AHTGAEAQRQ ALAALDAARR AGGHCARIWL
V
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