Gene Krad_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_0962 
Symbol 
ID5335230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009664 
Strand
Start bp1320775 
End bp1322322 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content71% 
IMG OID 
ProductAlpha-N-arabinofuranosidase 
Protein accessionYP_001360714 
Protein GI152964930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0436846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00620003 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGCACCA CTGCACCGAC CAGCGGGACC CTGCACGGCG TCGTGGACCT CGACGTCGCC 
GGCGCCACCA TCAGCCGCCA CCTCTACGGC CACTTCGCGG AGCACCTCGG CCGGTGCATC
TACGAGGGGT TCTGGGTCGG GGAGGACTCC CCGATCCAGA ACACCTCCGG CGTCCGCGAC
GACGTCGTGC AGGCCCTGAA GGACATCAGC ATCCCCAACC TGCGTTGGCC CGGGGGCTGC
TTCGCCGACG AGTACCACTG GGAGAACGGC GTCGGCCCCC GCGAGGACCG CCCCTCGATG
GTCAACACCC ACTGGGGCGA CGTCGTCGAG GACAACTCCT TCGGCACCCA CGAGTTCATG
CGGCTGTGCG AGCTGCTGGG GGCGGAGCCC TACGTCTCGG GCAACGTCGG CTCGGGCACG
GTCCAGGAGA TGAGCGACTG GGTCGAGTAC CTCACCCGCT CCGGCGACGC CCCCATGTCC
CGGCTGCGCC GCGAGCACGG GCGCACCGAG CCGTGGAAGG TGCCGTTCTG GGGCGTCGGC
AACGAGGCCT GGGGCTGCGG CGGCAACATG ACCGCCGAGC AGTACGCCCA GCTCGCCTCC
CAGTTCTCCA CCTACGCCCG CAACCACGAC GGCAACGAGC TGTACCGCAT CGCCGCCGGC
CCCAACCGCG ACGACTACCA CTGGACCGAG ACGCTGATGA AGTCGATCAG CACCCTCGGC
GGCCCCGTGG AGGAGCGCCA CCACCAGCGC TGGCAGGCGC TGTCGTTCCA CTACTACACC
CACGCCAGCG ACGACTGGCA GCACAAGGGC TCGGCGACGG AGTTCGACGC CGGCGAGTAC
CACGCCACGA TGGTCAACGC CTGGCGCATC GACGAGATCG TCCGCGGCCA CTCCCGGGTC
ATGGACGCCT ACGACCCCGA CGCGACCATC GGCCTCGTCT GCGACGAGTG GGGCACCTGG
TGGGACGTCG AACCCGGCAC CAACCCCGGG TTCCTCTTCC AGCAGAACAC CCTGCGCGAC
GCGCTGGTGG CCGGTCTGCA CTTCGACGTC TTCCACGCCA ACGCCCGCCG GCTGGTGATG
GCCAACATCG CCCAGACGGT CAACGTGCTG CAGGCGATGG TCCTCACCGA CGGGGCGCGG
ATGGTCCTCA CCCCGACGTA CCACGTGTTC GCGATGAACG CCGGGCACCA GGACGCCACC
AGCCACCCCG TGCACGTCGT CGCCGGCGAC GCCCGCTACG AGGGCGAGGC GGGCGAGTAC
CGGACCCTGA CGACGTCGGT GAGCTCCCGC GAGGGCAGCG CGCTGGTCTC GGTCACCAAC
CTCGACGTCG AGCGCGGCGG GACGGTGCGC CTGGACCTGC GCGGGCGGGA CTGGACCGTG
GCGGCGGCGA CGCTGCTCGC GGCCCCCTCC CTGCAGGAGC ACAACACCGT GGAGAACCCG
ACCGCGGTCG CGCCGGTCCC CTTCGACGGG GCCCGCCGCG AGGGCGACAC CCTCGTCGTC
GAGCTGCCCG CGCACTCCTT CGCCACGGTG CAGCTCACCC TCGGCTGA
 
Protein sequence
MSTTAPTSGT LHGVVDLDVA GATISRHLYG HFAEHLGRCI YEGFWVGEDS PIQNTSGVRD 
DVVQALKDIS IPNLRWPGGC FADEYHWENG VGPREDRPSM VNTHWGDVVE DNSFGTHEFM
RLCELLGAEP YVSGNVGSGT VQEMSDWVEY LTRSGDAPMS RLRREHGRTE PWKVPFWGVG
NEAWGCGGNM TAEQYAQLAS QFSTYARNHD GNELYRIAAG PNRDDYHWTE TLMKSISTLG
GPVEERHHQR WQALSFHYYT HASDDWQHKG SATEFDAGEY HATMVNAWRI DEIVRGHSRV
MDAYDPDATI GLVCDEWGTW WDVEPGTNPG FLFQQNTLRD ALVAGLHFDV FHANARRLVM
ANIAQTVNVL QAMVLTDGAR MVLTPTYHVF AMNAGHQDAT SHPVHVVAGD ARYEGEAGEY
RTLTTSVSSR EGSALVSVTN LDVERGGTVR LDLRGRDWTV AAATLLAAPS LQEHNTVENP
TAVAPVPFDG ARREGDTLVV ELPAHSFATV QLTLG