Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_0891 |
Symbol | gpmA |
ID | 5333814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 1399944 |
End bp | 1400696 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | phosphoglyceromutase |
Protein accession | YP_001360643 |
Protein GI | 152964859 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00049207 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTGAAG CGGCGCACAC CCTCGTCCTC CTGCGGCACG GCGAGAGCGA GTGGAACGCC CTGAACCTGT TCACCGGGTG GGTCGACGTG GCCCTCTCGG AGAAGGGCCG GGCCGAGGCC GCGGCCGGGG GGCGGATGCT CGTCGAGAAC GGCGTCCTGC CCGACGTCGT CCACACCTCC GTGCTGCGGC GCGCGATCAC GACGGCGTTC CTCGCCCTCG ACGCCGCCGA CCGGCACTGG ATCGACGTGA AGCGGTCCTG GCGGCTCAAC GAGCGCCACT ACGGGGCGCT GCAGGGCAAG GACAAGAAGC AGACGCTGGC GGAGTTCGGC GAGGAGCAGT TCATGCTCTG GCGCCGCTCC TACGACACCC CGCCGCCGGC CATCGAGGCG GGTTCGGAGT TCTCCCAGGA CGGCGACCCG CGCTACGCCG GGCTCGGCGA CGACATGCCG GCCACCGAGT GCCTGGCCGA CGTCGTGGCC CGCATGCTGC CCTACTGGAC CGAGTCGGTC GTCCCCGACC TGCGGGCCGG GCGGACGGTC CTGCTCGCCG CCCACGGCAA CTCGCTGCGC GCGCTGGTGA AGCACCTCGA CGGCGTCTCC GACGCCGACA TCGCGGGGCT GAACATCCCC ACCGGCATCC CGCTGGTGTA CCGCCTGGAC GCGGACCTGA AGCCCCTCGT CCCCGGCGGG GAGTACCTCG ACCCCGCCGC CGCGGCCGCG GCCGCGGCCG CCGTCGCCAA CCAGGGCCGC TGA
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Protein sequence | MTEAAHTLVL LRHGESEWNA LNLFTGWVDV ALSEKGRAEA AAGGRMLVEN GVLPDVVHTS VLRRAITTAF LALDAADRHW IDVKRSWRLN ERHYGALQGK DKKQTLAEFG EEQFMLWRRS YDTPPPAIEA GSEFSQDGDP RYAGLGDDMP ATECLADVVA RMLPYWTESV VPDLRAGRTV LLAAHGNSLR ALVKHLDGVS DADIAGLNIP TGIPLVYRLD ADLKPLVPGG EYLDPAAAAA AAAAVANQGR
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