| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0729 |
|---|
| Symbol | |
|---|
| ID | 5333718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009664 |
|---|
| Strand | - |
|---|
| Start bp | 1558984 |
|---|
| End bp | 1559514 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function UPF0079 |
|---|
| Protein accession | YP_001360482 |
|---|
| Protein GI | 152964698 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00214278 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.369364 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTGC CCCCCGCCGC GCCGCGGCGC GAACTCGTCC TGCCCGGCCC GCAGGACACC
GAGGCCTTCG GGGCCCGGGT CGGGGCGTCC CTGCGGGCCG GGGACCTCGT GCTCCTCTCG
GGGGACCTGG GGGCGGGCAA GACCACCTTC ACCCGGGGGC TGGCCCGCGC CCTGGGCGTG
CGCGGCCCGG TCACGTCCCC GACGTTCGTC ATCGCCCGCG TGCACCCCTC GCTGGTCGGC
GGGCCCGAAC TCGTCCACGT CGACGCGTAC CGCCTCGGGT CGCTGGCCGA GGTCGACGAC
CTCGACCTGG ACACCGACGC CGAGGAGGCC GTCACCGTCG TGGAGTGGGG CCGGGGCCTG
GTGGAGGAGC TCTCCCGCGA CCGGCTGGAG ATCGACCTGC TGCGCCCGCA CGGCGCGGCC
GGCGGCGGGC CGGACGGCGT CGCGGCCGCG GAGGACGAGG CACCGGTGGA GCCGCGCCGG
GTCACCGTGC GGGGGATCGG GGAGCGCTGG GCGGGGGTCG ACCTCGGGTG A
|
|---|
| Protein sequence | MSVPPAAPRR ELVLPGPQDT EAFGARVGAS LRAGDLVLLS GDLGAGKTTF TRGLARALGV
RGPVTSPTFV IARVHPSLVG GPELVHVDAY RLGSLAEVDD LDLDTDAEEA VTVVEWGRGL
VEELSRDRLE IDLLRPHGAA GGGPDGVAAA EDEAPVEPRR VTVRGIGERW AGVDLG
|
|---|
| |