| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_0487 |
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| Symbol | |
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| ID | 5337756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kineococcus radiotolerans SRS30216 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009664 |
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| Strand | - |
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| Start bp | 1802589 |
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| End bp | 1805480 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001360241 |
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| Protein GI | 152964457 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.957852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00303001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGCGGGCA AGTCCCAGGG AACGCGAGCG TCCGGTGACG GACTGCGCCG ACTGGTGATC
GTCGAGTCCC CGAGCAAGAT CGACAAGATC TCGACGTACC TGGGCCCGGG GTACCAGGTG
GAGGCCAGCT ACGGCCACAT CCGCGACCTC CCCCAGCCCT CCCAGCTGCC CGAGGACGTC
AAGAAGGGCC CGTACGGGAA GTTCGCGGTC GACGTCGACC ACGGCTTCGA GCCGTACTAC
GTCGTCGACG ACGACAAGAA GAAGAAGGTC AACGAGCTCA AGCGCGCCCT CAAGGACGCC
GACGAGCTCA TCCTCGCCAC CGACCGCGAC CGCGAGGGCG AGGCCATCGC CTGGCACCTC
GTGCAGGCCC TCGAACCGCG CGTGCCCTAC CGGCGCATGG TGTTCGGCGA GATCACCCGC
GAGGCGATCC AGCAGGCCGT CGGCGAGCTG CGCGACATCG ACGACCGCAT GGTCGACGCG
CAGGAGACCC GGCGCATCCT CGACCGCCTC TACGGCTACG AGCTGTCCCC GGTGCTGTGG
CGCAAGGTCC GCGCGGGGTT GTCCGCCGGT CGCGTGCAGT CCGTCGCCAC CCGCCTCTGC
GTGGAGCGCG AGCGCGAGCG GATGGCCTTC GTCGCCGCCG GCTACGCCGA CGTCACCGGC
ACCTTCACCG CCACCGGCGA GCAGGCCGGT TCCGCCTTCT CCGCCCGCCT GTCCAGCCTC
GACGGCAAGC GCGTCGCCAC CGGCCGCGAC TTCGGCGACG ACGGGCGGCT GAAGGCGTCC
AGCGCGAACG TCGCCCACCT CGACGTCCCC GCCGCGCAGG CCCTCGTCGA CGGGCTGGAC
GGCGCCTCCT TCGCGGTGCG CGGGGTGGAG GAGAAGCCGT ACACCCGCCG CCCGGCGGCG
CCGTTCATCA CCTCCACGCT GCAGCAGGAG GCCTCCCGCA AGCTGCGCCT GAACGCCCGC
CAGGCCATGC GCACCGCGCA GGGCCTCTAC GAGCGCGGCT ACATCACCTA CATGCGCACC
GACTCCGTCC AGCTGTCCTC GCAGGCGCTG TCGGCGGCGC GGGCGCAGGC GCGGGAGCTG
TACGGGCCGG AGTACGTGCC GGACTCCCCG CGGGCGTACG CGTCGAAGTC GAAGAACGCG
CAGGAAGGCC ACGAGGCGAT CCGCCCGGCG GGGGAGACGT TCCGCACCCC GGCGCAGGTC
TCCGGCGAGC TGCGCGGGGA CGACTTCCGC ATGTACGACC TCATCTGGAA GCGCACCGTC
GCCTCGCAGA TGCACGACGC CCGCGGGACG ACCGCGACGG TGCGCCTCGG CGCGACCACG
GACGACGGCC GCGACGCCGA GTTCTCCGCC TCGGGCACGA TCATCACCTT CCGCGGGTTC
CTCGCCGCCT ACGAGGAGGG GCGCGACGCG ACCCGCGACG CGGACTCCGA GGGCGCGGGC
GACGAGGACC GCCGCCTGCC GCAGGTCGTC GCGGGCGACC CGCTGACCGC CTCCGACCTC
GCCACCGCCG GGCACGAGAC GTCCCCGCCG GCCCGCTACA CCGAGGCCAG CCTGGTGAAG
GCGCTGGAGG AGAAGGGGAT CGGGCGTCCC TCGACGTTCG CCTCGATCAT CTCCACGATC
GTCGACCGCG GCTACGTGAC GTACAAGGGC TCCGCCCTGG TGCCGTCGTG GCTGGCGTTC
GCGGTGACGC GGCTGCTGGA GGAGCACTTC CCCAAGCTCG TCGACTACGA CTTCACCGCC
GGGATGGAGA ACGACCTCGA CGCGATCTCG CGCGGGGAGG CCGAGCGCGT GGACTGGCTG
ACGCGGTTCT ACTTCGGGGC CGCCGGCCCG ACGGCCGGGG CCGTGGTCGC GGACGGGCCG
GACGGCTCCG GCGGCGGGGC GGCGCTGGAC GGCATCAAGG GCCTGGCCGA CGACCTCGGT
TCCATCGACG CCCGCGAGAT CTCCACCATC CCCATCGGGG AGGGCATCGT CCTGCGGGTG
GGCCGCTACG GCCCCTACCT GGAGGGTCCC GACGTCGAGA CCGGTGAGCT GCTGAAGGCG
TCGGTTCCCG AGGACATCGC GCCCGACGAG ATGACCGTGG ACAAGGCGCG GGAGCTGCTG
ACCTCGCAGT CCGACGGCGA CAACGTCCTG GGCCAGGACC CGGAGTCGGG GCGGACGATC
GTGGCGCGGG TGGGCCGCTA CGGGCCCTAC GTCACCGAGC TCGTCGAGGA CGACGCCCCG
GCGCCCGCGC CGGAGGAGCC CGCCGAGGGG GCGCCGAAGA AGCGCGCGGC CAAGAAGGCG
GCGAAGGTCA AGCCGCGCAC CGGGTCGCTG TTCAAGGACA TGTCGGTGGA CTCCGTGACG
CTGGAGCAGG CCCTGCAGCT GCTGTCGCTG CCGCGCGTGG TCGGGACGGA CCCGGAGACC
GGTGACGAGA TCACCGCGCA GAACGGCCGC TACGGGCCGT ACCTGAAGAA GGGCACGGAC
TCCCGCTCGC TGGAGACCGA GGACCAGATC TTCTCCATCA CCCTGCCCGA GGTCCTCGCG
ATCTACGCCC AGCCCAAGAT GCGGCGCGGC CAGGTGGCCA AGCCCCCGCT GAAGGAGCTC
GGCGCCGACC CGGAGTCCGG TCAGCCCATC GTCATCAAGG ACGGCCGCTT CGGCCCGTAC
GCGACCGACG GCACGACCAA CGCGACGCTG CGCAAGGACG ACGACCCCGA GACGGTGACG
CTGGAGCGCG CCGCGGAGCT GCTCGCCGAG AAGCGGGCCA AGGGGCCGGC GAAGAAGACC
GCGCGCAAGA CGGCGACGAA GAAGACGGCG GCGAAGACGA CCACCGGGAC CGCGACGGTC
AAGAAGACCG CCGCGAAGAA GACCGCGGCG AAGAAGACGA CGGCCAGGAA GACGGCCGCG
GCGGAGTCCT GA
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| Protein sequence | MAGKSQGTRA SGDGLRRLVI VESPSKIDKI STYLGPGYQV EASYGHIRDL PQPSQLPEDV
KKGPYGKFAV DVDHGFEPYY VVDDDKKKKV NELKRALKDA DELILATDRD REGEAIAWHL
VQALEPRVPY RRMVFGEITR EAIQQAVGEL RDIDDRMVDA QETRRILDRL YGYELSPVLW
RKVRAGLSAG RVQSVATRLC VERERERMAF VAAGYADVTG TFTATGEQAG SAFSARLSSL
DGKRVATGRD FGDDGRLKAS SANVAHLDVP AAQALVDGLD GASFAVRGVE EKPYTRRPAA
PFITSTLQQE ASRKLRLNAR QAMRTAQGLY ERGYITYMRT DSVQLSSQAL SAARAQAREL
YGPEYVPDSP RAYASKSKNA QEGHEAIRPA GETFRTPAQV SGELRGDDFR MYDLIWKRTV
ASQMHDARGT TATVRLGATT DDGRDAEFSA SGTIITFRGF LAAYEEGRDA TRDADSEGAG
DEDRRLPQVV AGDPLTASDL ATAGHETSPP ARYTEASLVK ALEEKGIGRP STFASIISTI
VDRGYVTYKG SALVPSWLAF AVTRLLEEHF PKLVDYDFTA GMENDLDAIS RGEAERVDWL
TRFYFGAAGP TAGAVVADGP DGSGGGAALD GIKGLADDLG SIDAREISTI PIGEGIVLRV
GRYGPYLEGP DVETGELLKA SVPEDIAPDE MTVDKARELL TSQSDGDNVL GQDPESGRTI
VARVGRYGPY VTELVEDDAP APAPEEPAEG APKKRAAKKA AKVKPRTGSL FKDMSVDSVT
LEQALQLLSL PRVVGTDPET GDEITAQNGR YGPYLKKGTD SRSLETEDQI FSITLPEVLA
IYAQPKMRRG QVAKPPLKEL GADPESGQPI VIKDGRFGPY ATDGTTNATL RKDDDPETVT
LERAAELLAE KRAKGPAKKT ARKTATKKTA AKTTTGTATV KKTAAKKTAA KKTTARKTAA
AES
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